Gene Franean1_6463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6463 
Symbol 
ID5674778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7856865 
End bp7857716 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content70% 
IMG OID641245311 
Productmethyltransferase type 11 
Protein accessionYP_001510706 
Protein GI158318198 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0440629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACCG AGCTCGCCGT CGACGCGTCG AACGCCACCC AGCTCGCCAG CTGGGACGGA 
AATGGAGGCG CTTTCTGGGT CGCCAACGCC GATCGTTTCG ATGAGGGGGT CGCCGCGTAC
CGCGATCGGT TTCTGGCCGC GACCGCGATC GACGAGACAG CGGCCGTGCT CGATGTCGGT
TGCGGCGGCG GGCGGACGAC CCTGGACGCC GCCTGCCGCG CCGCCGCTGG ATCTGTCCTG
GGTGTGGACC TGTCCTCGGA GATGCTCGAG CTGGCCCGCC GGCGCGCCGA ACGCGAGCAC
GTCACGAACG CGACCTTCGA GCAGGCCGAC GCGCAGATCC ACCCCTTTCC CACCGGAGCC
TTCGACGTCG CCGTCAGCCG ACACGGGGTG ATGTTCTTCG GCGATCCCGT CGCCGCCTTC
ACCAACCTCG CGCGCGCCCT GCGCCCCGGC GGGCGCATCG TCCTACTGAC CTGGCAGCCG
TTCGAGCGCA ACGAGTGGCT CAAGGCCTTC TTCACCTCAC TGGCCGCCGG CCGTGAGATA
CCTGTCCCAC CATCGGACGC GCCGAGTCCG TTCGCCCTCA GCGACCCCAA CCGGATCCGG
TCGCTCCTGA ACGCGGCCGG GTTCTCCGAC GTCCACCTGG AGGGCCTCGT CGAGCCCATG
TATTTCGGCA CCGACCCCGA CGACGCCTTC CGGTTCGTCT CCGCCCAGCA TGCCGGACTG
GTGCGCGACC TCGACGCCAG CGCCAAAGGC CGCGCACTCG ACGATCTACG AGCCAACCTG
GCCGAGCACC ACACCGAACG AGGCGTCCTG TACGACTCGG CAGCCTGGCT CATCCAGGCC
CGCCGGGACT GA
 
Protein sequence
MVTELAVDAS NATQLASWDG NGGAFWVANA DRFDEGVAAY RDRFLAATAI DETAAVLDVG 
CGGGRTTLDA ACRAAAGSVL GVDLSSEMLE LARRRAEREH VTNATFEQAD AQIHPFPTGA
FDVAVSRHGV MFFGDPVAAF TNLARALRPG GRIVLLTWQP FERNEWLKAF FTSLAAGREI
PVPPSDAPSP FALSDPNRIR SLLNAAGFSD VHLEGLVEPM YFGTDPDDAF RFVSAQHAGL
VRDLDASAKG RALDDLRANL AEHHTERGVL YDSAAWLIQA RRD