| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6443 |
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| Symbol | |
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| ID | 5674758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 7834192 |
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| End bp | 7834953 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641245291 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001510686 |
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| Protein GI | 158318178 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.246968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.169503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTAT TGGACAGATT CCGCCTCGAC GGCAGGGTCG CCATCGTCAC CGGGGCCTCG
TCGGGGATCG GCGTCGGCTT CGCCCGCGGG CTCGCCCAGG CCGGCGCGGA CGTCACTCTC
GGTGCCCGGC GCACCGACCG GCTCGCCGCG ACCGCCGCGC TGGTCGAGGC GGAAGGCCGC
CGGGCCGCCG CCGTCGGCAC CGACGTGGCC GACCCGGAGT CGTGCCGGAA CCTCGTCACG
GCCGCCATGG ACACCTTCGG GCGGGTCGAC ATCCTGGTCA ACAACGCCGG GGTCGGTTCG
GCCCACCCGG CGCTGCGGGA GACCCCGGAG CAGTTCCGCT CGGTCATCGA CGTCAACCTC
AACGGCTGCT ACTGGATGGC CCAGGCCGCC GCGGCCGTCA TGCAGCCGGG CAGCAGCATC
ATCAACATCT CCAGCGTGCT CGGCCTGACG ACGGCCGGCC TCCCGCAGGC CGCCTATTCG
GCCAGTAAGG CGGCCCTGCT CGGGCTGACC CGCGACCTCG CCCAGCAGTG GACGGGCCGG
CGCGGGATCC GCGTGAACGC CCTGGCCCCC GGGTTCTTCG AGTCCGAGAT GACCGACCAG
TACCTGCCCG GGTACCTGGA GAGCCAGTCG GCACGGATCC TCGCCGGCCG CTTCGGCGAC
CTTGAGGAGC TGACCGCCGC GCTGGTCTTC CTCGCCTCCG ACGCCGGCGG CTACGTCACC
GGACAGACCC TCGTCGTCGA CGGCGGTGTC TCCATCACCT GA
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| Protein sequence | MSVLDRFRLD GRVAIVTGAS SGIGVGFARG LAQAGADVTL GARRTDRLAA TAALVEAEGR
RAAAVGTDVA DPESCRNLVT AAMDTFGRVD ILVNNAGVGS AHPALRETPE QFRSVIDVNL
NGCYWMAQAA AAVMQPGSSI INISSVLGLT TAGLPQAAYS ASKAALLGLT RDLAQQWTGR
RGIRVNALAP GFFESEMTDQ YLPGYLESQS ARILAGRFGD LEELTAALVF LASDAGGYVT
GQTLVVDGGV SIT
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