| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6441 |
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| Symbol | |
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| ID | 5674756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 7832589 |
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| End bp | 7833386 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641245289 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001510684 |
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| Protein GI | 158318176 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0396102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.168546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGA TGACTCAGCC GGAGCAGTCG GACGCGGGCA GGGGGGTCGC CGTCGTGACC
GGGGGCAGCC GGGGCATCGG CGCCGCCTGC GCCCGCCTGC TGGCGCGGGC CGGGTGGACG
GTCTGCGTCA CCTACCGTTC GGACGAGGCC GCCGCGCAGG AGGTTGTCCG GGAGTGCGAG
GCCGCCGCGC GGGCCCGCGG CACGCCGGCC GGGGCCGCCG CCGTCGCCGC GGACCTGGCC
GATCCGGAAC AGATCCCCGG GGTCTTCACC GCGGCCGACC GCCTCGGCCC GCTCACCGTC
CTGGTGAACA ACGCCGGGAT CGTCGACCGC CAGATGCGGG TGGACGAGAT GACCGCCGGC
CGGCTGACCC GGATGTTCAC CGTCAACACG GTCTCGTCGA TCCTGTGCGC CGGGGAGGCC
GTCCGCCGGA TGTCGACCCG GCACGGCGGC ACCGGCGGGT CGATCGTCAA CATGTCGTCG
GCGGCGGCCA GGCTCGGCAG CCCGGGGCTG TACGTCGACT ACGCGGCGAG CAAGGGCGCG
ATCGACACGC TGACCCTCGG CCTGGCCAGG GAGGTCGCGG GCGAGGGCGT GCGGGTCAAC
GCGGTGCGCC CGGGGATCAT CGCCACCGAC ATCCACACCA GCAGCGGGGA CCCGGGGCGG
CCCGCCCGGA TGGCGGGCAG CATCCCGATC GGCCGCGTGG GCACCGCCGA CGAGGTCGCC
CAGGCCGTGG CCTGGCTGTG CTCGTCGGCC GCGTCCTACA CGACCGGCGC GATCCTGGAC
GTCGCCGGCG GCCGTTGA
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| Protein sequence | MTAMTQPEQS DAGRGVAVVT GGSRGIGAAC ARLLARAGWT VCVTYRSDEA AAQEVVRECE
AAARARGTPA GAAAVAADLA DPEQIPGVFT AADRLGPLTV LVNNAGIVDR QMRVDEMTAG
RLTRMFTVNT VSSILCAGEA VRRMSTRHGG TGGSIVNMSS AAARLGSPGL YVDYAASKGA
IDTLTLGLAR EVAGEGVRVN AVRPGIIATD IHTSSGDPGR PARMAGSIPI GRVGTADEVA
QAVAWLCSSA ASYTTGAILD VAGGR
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