| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6412 |
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| Symbol | |
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| ID | 5674727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7784650 |
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| End bp | 7786599 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641245260 |
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| Product | ABC transporter related |
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| Protein accession | YP_001510655 |
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| Protein GI | 158318147 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.443999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCC CACCCGCGGG CGGGGCCCGC CCCATGGCAG GCCCCGGTCG GTTCTTCGCC
GCCGGGGGCG AGAAGCCCGA GGATTTCGCG GCCTCGACCC GGCGGGTGCT CCGCCTGCTG
GGCCGGCAGC GCGCGTTGCT GATCCCCGCG GTCGCGCTGG CGGTGGTCGG GATCGCGCTC
ACCGTCACCG GGCCGCGGCT GCTCGGGCAC GCCACCGACC TGGTGTTCGC CGGCCTGCTC
AGCTCCCGGC TGCCCGCCGG GACGACGAAG GCCGAGGCCG TCGCGCGGCT GCGCGCCGAG
GGCCACGGCA CGCAGGCCGA CCTGCTGTCC TCCGTCGACG TCACCCCCGG TGAGGGGATG
GACTTCGGCG CGATCGGCCG GGTGCTGCTG GTGGTGCTGA TCGTCTACCT CGTCGCCGGC
CTCTGCACGG TGCTGCAGGC CCGGCTGGCG AACAAGGCCC TGCAACGGAT GCTGAGCGAC
CTGCGGGCCG ATGTGCAGGA GAAGATCACC CGCCTGCCGC TGCGGTACTT CGACCGCCGC
CAGCGCGGCG AGGTGCTCAG CCGGGTCACC AACGACATCG ACAACCTCGG GCAGAACCTG
CAGCAGAGCC TGTCCCAGAT GATCGCCTCG GTGCTGACCA TCATCGGCGT GCTGGCCATG
ATGATCTGGA TCTCCTGGAT CCTCGCACTG ATCGCCGTCG TCACGGTGCC GGTGTCGATC
GTGATCACCA CCCGGATCGG CAAGTTCGCC CAGCCCCAGT TCGTCAGCCA GTGGAAGACG
ACCGGCCGGC TCAACGGCCA CATCGAGGAG ATGTACACCG GGCACGCCCT GGTGCGCGCG
TTCGGCCGGC AGGAGGAATC CGCCGAGATC TTCCGGGAGC ACAACGAGCG CCTCTACGAG
GCGAGCTGGC GGGCCCAGTC CATCTCCGGT CTCATGCAGC CGGCGATGAT GTTCATCGGC
AACCTGAACT ACGTGCTGGT GGCCGTCGTC GGTGGCCTTC GGGTGGCCTC CGGCGCGCTG
TCGATCGGCG ACGTCCAGGC GTTCATCCAG TACTCGCGAC AGTTCAGCCA GCCGCTGACG
CAGCTCGCCA GCATGGGGAA CATGGTGCAG TCCGGGATCG CGTCGGCGGA GCGGGTGTTC
GACCTGCTGG ACGCGCCCGA GCAGGAGCCC GACCCGCTGG CGCCGGCCCG CCCGGAGGAG
AACCACGGCC GGGTCGCCTT CGAGCACGTC GCGTTCCGCT ACGAGCCGGA CAAGCCCCTC
ATCGACGACC TGTCGCTGGT TGCCGAGCCG GGGCACACCG TGGCGATCGT CGGGCCCACC
GGCGCCGGAA AGACCACACT CATCAACCTG CTGATGCGCT TCTACGAGGT CACCGAGGGC
CGGATCACCC TGGACGGCGT CGACATCGCC GAGATGTCGC GGGCGGACCT GCGGCGATCC
ATCGGGATGG TGCTGCAGGA CACCTGGCTG TTCGGCGGCA CCATCGCGGA GAACATCGCC
TACGGCGCCG AGGGCGCCAC CCGCGAACAG GTCGTCGAGG CGGCCCGCGC CGCGCACGTC
GACCGGTTCG TGCGCACGCT CCCCGACGGC TACGACACCG TGCTCGAAGA CGAGGGCGTC
GGGGTCAGCG GCGGCGAGAA GCAGCTCATC ACCATCGCGC GCGCGTTCCT CGCCGAGCCG
CTGATCCTCG TCCTGGACGA GGCGACGAGC TCGGTGGACA CCCGCACCGA GGTGCTGATC
CAGCGGGCGA TGTCCCGGCT GCGCGCCGGC CGCACGGCCT TCGTGATCGC CCACCGGCTG
TCCACCATCC GGGACGCCGA CACGATCCTC GTCATGGAGG ACGGCGCGAT CGTCGAGCAG
GGCGACCACG ACGCCCTGCT GGAGGCGGAC GGCGCCTACG CGCGGCTGTA CAAGGCCCAG
TTCGCCCAGG CCGTCGTCGA GACCGGCTGA
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| Protein sequence | MTRPPAGGAR PMAGPGRFFA AGGEKPEDFA ASTRRVLRLL GRQRALLIPA VALAVVGIAL
TVTGPRLLGH ATDLVFAGLL SSRLPAGTTK AEAVARLRAE GHGTQADLLS SVDVTPGEGM
DFGAIGRVLL VVLIVYLVAG LCTVLQARLA NKALQRMLSD LRADVQEKIT RLPLRYFDRR
QRGEVLSRVT NDIDNLGQNL QQSLSQMIAS VLTIIGVLAM MIWISWILAL IAVVTVPVSI
VITTRIGKFA QPQFVSQWKT TGRLNGHIEE MYTGHALVRA FGRQEESAEI FREHNERLYE
ASWRAQSISG LMQPAMMFIG NLNYVLVAVV GGLRVASGAL SIGDVQAFIQ YSRQFSQPLT
QLASMGNMVQ SGIASAERVF DLLDAPEQEP DPLAPARPEE NHGRVAFEHV AFRYEPDKPL
IDDLSLVAEP GHTVAIVGPT GAGKTTLINL LMRFYEVTEG RITLDGVDIA EMSRADLRRS
IGMVLQDTWL FGGTIAENIA YGAEGATREQ VVEAARAAHV DRFVRTLPDG YDTVLEDEGV
GVSGGEKQLI TIARAFLAEP LILVLDEATS SVDTRTEVLI QRAMSRLRAG RTAFVIAHRL
STIRDADTIL VMEDGAIVEQ GDHDALLEAD GAYARLYKAQ FAQAVVETG
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