| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6357 |
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| Symbol | |
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| ID | 5674673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 7716326 |
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| End bp | 7718473 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641245206 |
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| Product | TIR protein |
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| Protein accession | YP_001510601 |
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| Protein GI | 158318093 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGAAC ACTGCGATGC GGACGGCCAT GCCGGTTACG ACTTCTGCGT GTCGTATGCG
CTGGCGGACA CGGCCTGGGC GACGTGGATT GCCTGGACGC TGGAGGAGAC CGGGTACCGG
GTTCAGATCC GAGCCTGGGA TTCCGTTCCC GGATCCCACT GGGTTGCGGC CATCGACGAC
GGCCTGCAAC GGTCCGACCG GACGATCGCG GTGCTGTCCG ACAACTACCT TCGTTCAGAG
CTGCACCAAG CGGAATGGCG GGCTGCCTGG GCCGACGACC CGACGGGCCG GAGCCGACGG
CTTCTCGTCG CCCGGGTCAC GGACTGCGCG CCGCCGGGGC TGCTCGGCTC GGTCGTCCCG
GTCGACCTAT TCGGCCGGCC GCGGGATGTC GCTCGTTTTC AGCTGCTGTG GGCGGCGGGG
CTGGCGGTCT CGGGCGGACG GGGAAAGCCC ACTTCCGCGC CGCCGTACCC GCAGGACGAC
AGGGTGGTGT CCGTCCAGCC GTCGTTTCCC GGTCCGGAGG CGCCGGATTC CGCAGGGCAC
GGCGCCATGT TCTTCTCCTG TCCCGAGCCG CGCCTTTCCC TTGCCGGCGC GCCGAGTGTG
CTGCTGCGGC CCGAGCACAG TGTCGCGCCG TTCGTCGAGC TCGACGGCGA CCGGGCGGCG
CTGCGGCTGT GGGCGGCCGG ATCGGACCCG GTCTCCGTGC GGCTGCTGAA GGGTGCGGCC
GGCTCGGGCA AGACCCGGCT GGCGATGCGG GTCTGCGCGG AGCTGAGCGA GCGGGGCTGG
CTGACGGTGG TGGTCAACTC GTCGTTGAGC CCAGCCCAGC TTCAGTGCCT GTGCGAGTCC
GACGTCCCGG TGCTGGTGGT CGTCGACAGC GCCGAGCTCC GTCTCGACCA GGCCGTTCTG
GTCGCCGCCG CACTTGTGGA GGGGACCGCG CCTGGTGCCT CGCCGCGGCG GCTGCTCCTC
CTCACCCGGT CCACCGAGCT GTTGCTGGAG GATCTGTGGT CGCTGGCCGA TAGCCGGGCC
GACGCTGGGG CCGCCGATCT GTTCCGGGCG GCCCGGGTTC AGGCGAAGAC GCCGCTTCCG
GCCGGGGCCG ACGCGCGACA CGTCCACTTT GAGGCTGCCT ACACGGCGTT CCGTGTCGAG
CTGCGGCAGA TCGGGCCGAT CGCCGCGCCT CCGGCTGATC TCGTCGACCT TCACTCGGTG
CTGGACGTCC ACGCGGCGGC GCTGAACGCG TGTCTCGACA GCACCCGCGG CTCCCGGGCC
CCGCTTGCCA CGCTCCTGGA TCATGAGCGG CGCCGCTGGC CCGGAGGCGA TCGTGGCGGC
GGCCGTCCTC GGCCGGGTCT GACCGACAGG ATCTGCGCGC TGGCCACACT CCTGCGGCCT
GGCTCCTTCC TGTCGGCGGA GGCGTTGTCG GCCCAGCTGC CCGGGATCCT CGGTGTCGAC
GCCGAGCGGA TTCGGCGGTG TCAGGACGAG CTCGGTGCGC TCTATCCGGG TCGATGGAGG
TTCGATCAGA TCCGGCCCGA CGCATACGGG GAACACGTGG CCGCCGGCAC TCTGGTAGCC
GACCCTTCGC TTGCTCGTGC CCTGGGCCGT CTCTGTTCTG CCGAGCAGGC GGCGGACGTC
CTCGCGGTGC TCGGCTGCGC GCTGCCCCGC CATCCGGAGC TGGCCACGAC GATCGTGGAG
ATGCTGCGGA CGAGGCCCGA CGAACTGGTT CTCGTGGCGG CCGACGTCGC GACCCGCCTG
CCTGACCCGG AACAGTTCGC ACGGACCACC GCCGACGCGT TTGACGACGC GACCATCCGC
CAGCTCACGC TCGTCACGGC GACGGCGCTG GCCGAGCGGG TACGGCGCGG CGGCCGGGAA
CTCGGCCCGC TGCGTGGCCT GACCCTGCGT GCGTCGGCCG CGGGCGGACG CAGGCTGACC
GCGGGTTTCA CCGAACCGGC GGCGCCGGAT CCCACAACGG CCGGCCTGGC CAGGGTTGCC
GAACGAGTGA CCGACGGCAT TGTCGATCTT CTTGTGGGCC TTGTCGACCC AGGTTCCGGG
CGCATGCCTC CGCAGGCTGA CGGAAGTCCG AACATCGCAC CAGATCTCCT TGGCACGCTT
TTTGACCTCC AACGACATTT CCGGAGGTCG GATCCCGAGA CGAAGTGA
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| Protein sequence | MTEHCDADGH AGYDFCVSYA LADTAWATWI AWTLEETGYR VQIRAWDSVP GSHWVAAIDD
GLQRSDRTIA VLSDNYLRSE LHQAEWRAAW ADDPTGRSRR LLVARVTDCA PPGLLGSVVP
VDLFGRPRDV ARFQLLWAAG LAVSGGRGKP TSAPPYPQDD RVVSVQPSFP GPEAPDSAGH
GAMFFSCPEP RLSLAGAPSV LLRPEHSVAP FVELDGDRAA LRLWAAGSDP VSVRLLKGAA
GSGKTRLAMR VCAELSERGW LTVVVNSSLS PAQLQCLCES DVPVLVVVDS AELRLDQAVL
VAAALVEGTA PGASPRRLLL LTRSTELLLE DLWSLADSRA DAGAADLFRA ARVQAKTPLP
AGADARHVHF EAAYTAFRVE LRQIGPIAAP PADLVDLHSV LDVHAAALNA CLDSTRGSRA
PLATLLDHER RRWPGGDRGG GRPRPGLTDR ICALATLLRP GSFLSAEALS AQLPGILGVD
AERIRRCQDE LGALYPGRWR FDQIRPDAYG EHVAAGTLVA DPSLARALGR LCSAEQAADV
LAVLGCALPR HPELATTIVE MLRTRPDELV LVAADVATRL PDPEQFARTT ADAFDDATIR
QLTLVTATAL AERVRRGGRE LGPLRGLTLR ASAAGGRRLT AGFTEPAAPD PTTAGLARVA
ERVTDGIVDL LVGLVDPGSG RMPPQADGSP NIAPDLLGTL FDLQRHFRRS DPETK
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