Gene Franean1_6347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6347 
Symbol 
ID5675787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7706978 
End bp7707580 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content69% 
IMG OID641245197 
ProductTetR family transcriptional regulator 
Protein accessionYP_001510592 
Protein GI158318084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAGCG AACCGGTGTC CTCGCCGGGT GCCGGGACCG TTGATCCGCG CGTGTTGCGC 
AGCCGCGCCG CCGCCCTCGC GGCAGCCCGC GCGATTCTCC TCGAAGACGG ATGGGAGGCC
GTCACCCACG TCGCGGTCGC CACCCGCAGC GGGGTCGGAC GAACGACCCT CTACCGGCAC
TGGCCGGACA CCATCGCGCT CCTGCGCGAT GTGCTCCGCG CGCAGATGGA GATCGACCAC
ACCGTTCCCA CGGGCGTCCT GCGCGATGAC CTGATCCGTG AACTCGACGC TCTACGCGGC
CAGCTCCACC AGCCCCCGCT GGAACGGGCG ATGCGGACGA TGATCGAGCG TGCGCCGACC
CACCCCGCCT ACGCCGAACT CAAGGAGTTC CTGTACCAGG AGGGCTCGCG CGTCCTCGGC
GAGATCGTCC GAGCTGGGAT CGCGCGGGGC GGGCTCGACC CGCGACTCGA CCCGTCCCGG
GCGGTCGACC AGTTGGCCGG ACCACTGATC TACCGACGGC TACTCGCCGG ACAGACGTTC
ACAGACGCCT ATGTGCATGA TCTCGTCGAT GATTTTCTTC GGGCACACAG GCCCCGTCCG
TGA
 
Protein sequence
MASEPVSSPG AGTVDPRVLR SRAAALAAAR AILLEDGWEA VTHVAVATRS GVGRTTLYRH 
WPDTIALLRD VLRAQMEIDH TVPTGVLRDD LIRELDALRG QLHQPPLERA MRTMIERAPT
HPAYAELKEF LYQEGSRVLG EIVRAGIARG GLDPRLDPSR AVDQLAGPLI YRRLLAGQTF
TDAYVHDLVD DFLRAHRPRP