Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6307 |
Symbol | |
ID | 5674626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7661447 |
End bp | 7663165 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641245160 |
Product | replication initiator protein |
Protein accession | YP_001510555 |
Protein GI | 158318047 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCTCC CGATCCCCGC CGGCCCTGCC CCGGCCGGCC CCCTCGACCC CACGGCCCGT GACGATCGTG ACGATCGGCC CGGTTCGCGG ATGGCCCGGA TGCGGATGCC GCTCGCTCGC CAGGTGGTCG AAGCGGTCGC CGTGGAGAAC GGGGTGTGCG TGCGGCCGAT GGCGATGCGG CGGACGAACC TCGACACGGG CGAGACCGAG ATCATCCCCG TGCCGTGTGG GGCCACCCTC GCCAGCAAGT GCCCGACCTG CGCGGAGAAA GCCCGGCGGC TACGGATGGC GCAGTGCAAA GCCGGGTGGC ACCTCGACGA CGAACCGCTT CCCGACCCGG ACCCGCCGAC GGACGACGCG AAGGTGCTTG CCGGGTTCCG CGCGGATTTG GAACTCGCCC GGCGGGACGC GGAACGGGAC AGTGACCCGG CCGGCGTCGC GGAGATCGAC GCGCTTATCG GCCAGGTGGA CGAGGAACTC AACGCCCTGG GCGTGCGCGG CAAGGCGGCT CCGGACAACC GGGACCGGGC TCGCCGTGCC CGCTCGACCC GCCGGCGGCA GGACGCACCC GACCTCCCCC GGCTGCCGGT GGAGAAGCGC ACGGTCGGCC GGACCTACGA AGCGGCGGAC GGGACGACCT GGCGTCCGTC GATGTTCCTG ACGCTGACCT GCGACACCTA CGGCCGGGTG ACCTCGGACG GCACCCCGGT GGATCCGGGG TCGTACGACT ACCGGCGGGC GGCCCGCGAC GCGATCCACT TCCCGAAGCT GATCGACCGG TTCTGGCAGA ACCTCCGCCG TGCGGTGGGC TGGGATGTGC AGTACTTCGC GGCGCTGGAA CCGCAACGGC GGCTCGCCCC GCACCTGCAC GCGGCCATCC GCGGCACCGT CCCCCGGGCC CTCCTGCGCC AGGTGGCGGC GGCGACCTAC CACCAGGTGT GGTGGCCACC CTGCGACCAA CCGGTCTATC CGGACACGGG ACTCCCGACC TGGGCGGACG ACGCGGGCGG CTACGTCGAT CCGGGCTCCG GCCGGCCGCT GCCGATGTGG GATGAGGCGC TCGACGCGAT CGGGGACGAG GACGAGGCGT CCCACGTGGT GCGCTTCGGC CCGCAACTGC AAGCGGACGG ATTCACCGCG AGCTCGGCGC ACACCGGCCG CATGATCGGC TACCTGTGCA AGTACCTGAC CAAGAGCCTC GACGCCTGCC ACACCACCAC GACCGACGCG CAACGTCGCC ACGTCGACCG GCTCGCCGAA GCCCTGCGCT ACGAACCCTG CGCACCCACC TGCGCCAACT GGCTCCGCTA CGGCGTCCAG CCGAAGAACC CGAAACCGGG CCTCGTCCCG GGCCGCTGCC GAGGGAAGGC ACACCGGCGG GAAACTCTCG GCTTCGGCGG CCGGCGGGTC CTGGTGAGCC GCAAGTGGTC CGGCAAGACC CTGACCGACC ACAAGCACGA CCGGGTGGCG TTCATCCGGG CGCAGCTCGA AGCCCTCGGC CACACCGCCA CCGGCCCGGC CGCGCACGAC ACCGACCCGG CGCGCACCGT CTGGACGCTG CTCCGGCCTG GCGACCCGGC CGCACCACGC CGTGAACACC TGCTGTTGCA GGCCGTCGCC CAACGCCACG CCTGGCGCGC ACAGCTCGAC ACGGCCCGGC GCACCGCACC CGACGAACTT CCGGCAATCG GCCCACCGGG CGGGGCACAA GCCGCCTGA
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Protein sequence | MTLPIPAGPA PAGPLDPTAR DDRDDRPGSR MARMRMPLAR QVVEAVAVEN GVCVRPMAMR RTNLDTGETE IIPVPCGATL ASKCPTCAEK ARRLRMAQCK AGWHLDDEPL PDPDPPTDDA KVLAGFRADL ELARRDAERD SDPAGVAEID ALIGQVDEEL NALGVRGKAA PDNRDRARRA RSTRRRQDAP DLPRLPVEKR TVGRTYEAAD GTTWRPSMFL TLTCDTYGRV TSDGTPVDPG SYDYRRAARD AIHFPKLIDR FWQNLRRAVG WDVQYFAALE PQRRLAPHLH AAIRGTVPRA LLRQVAAATY HQVWWPPCDQ PVYPDTGLPT WADDAGGYVD PGSGRPLPMW DEALDAIGDE DEASHVVRFG PQLQADGFTA SSAHTGRMIG YLCKYLTKSL DACHTTTTDA QRRHVDRLAE ALRYEPCAPT CANWLRYGVQ PKNPKPGLVP GRCRGKAHRR ETLGFGGRRV LVSRKWSGKT LTDHKHDRVA FIRAQLEALG HTATGPAAHD TDPARTVWTL LRPGDPAAPR REHLLLQAVA QRHAWRAQLD TARRTAPDEL PAIGPPGGAQ AA
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