| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6272 |
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| Symbol | |
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| ID | 5674591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 7617980 |
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| End bp | 7620157 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641245124 |
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| Product | P4 family phage/plasmid primase |
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| Protein accession | YP_001510520 |
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| Protein GI | 158318012 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3378] Predicted ATPase |
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| TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.613455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTACGC CGCCGCTGGA GCGGTTCTCC AACGCCTACA CAGCCGCCAC CGGATGGGGT
ATCGACCCCA CCCGCGCTCA GCAGGACGTC CGCTGCCCTG CTCATGAGGA CGGGTCGCCG
TCGCTGTCGG TCGGTGCCGG CCACGACGGG CGGGTGCTGC TGACCTGCCA GGCCGGGTGC
GATCTGGACG CGATCCTGGC CGCCGTCGAG CTGGCCACCG CCGACCTGTT CCCGCCCCGC
GGCGAGCAGG CGAAGCCGCA GATCGTCGCG TCGTATCCGT ACACCGACGA GCAGGGAACC
CGACTGTTCA CGGTCCACCG CAAGGAGCCG GGCCGGGACG GGAGCCGGAA GGAGTTCGTC
CAGCAGGCCG CGGACGGGTC CTGGAAGACC CGGGGTATCC GCAAGCCGCT GTACCGGCTG
CCCGAGGTTG TCGAGGCCGT GAAGAACGGT GCCGTCGTCT GGGTTGTCGA GGGCGAGAAG
GATGCTGACC GGCTCGCCAG CCTCAGCCTG ACGGCCACGA CCTGCCCGCA GGGCGCGAGG
AAGTGGAAAG CGGAGCACAC CGACAGCCTG TCCGGCGCCG CCGACGTGCG GGTCATCGCG
GACAACGACG ATCCGGGCCG GGCGCACGCC GCCCAGGTAG AGGCCGTTCT GCGGCCGGTC
GTGACCTCGG TGTCGGTGTG GCTGCCAGCC GCAGGTAAGG ACGTCTCCGA CCATCTGAAC
GCCGGTCACG GCCTGGACGA TCTGCGTCCG CTCGCCGTCG ACGAAGGGCC GGCGCCCGGT
GCTGCGTCGA CGGCTGCAGC CTCGACCGTT GACGCGGCAG AGCTTGAGAC CGACGACGCG
AACGCGCTGC GCCTGGTAGC GGAGTACGGG AACACGATCC GCCGCGTGTC GGACATGGGG
TCGTGGTGGC GCTGGACTGG AAAGCGATGG GAGCGGGATC ACGACGACGC CCACGTACGC
GAAGCCGCGA AGATCCTCGC CCGGAAGCTC CCGGCGGAAA CACTTGAGCA GCGGAAGTAC
AAGCGCGCGA GCCTGAGCAG CACGGGCCTG TCGGGAGCTA CGCGGGTCGC CCAGTCCGAC
CCGCGGGTCA CCGTGCTCGC CCGCGATCTC GACGCCCACC CGCACCTGCT GAACACACAG
TCCGGTGTGG TCGACCTCGT GACCGGAGCT GTAAAGCCGC ACGACCCATG GCTGATGCTG
ACCCGGATAA CCCCCCTCGA CGTCGACACC GAGGCCACAC ACCCGATGTG GTCCGAGTTC
CTCGCCGAGA CCTTCGGCGG GGACACCGAG CTGGTCGCCT ACGTACAGAG CCTGTGCGGA
CTCGCTCTGC TGGGCGACGT CCGGGAGCAC GTCCTGCCCC TCATGTACGG GGCTGGGGCC
AATGGGAAAG GCGTGATCCT GCTGGTCCTG CAGGGTCTCC TGGGCATCGC CGACACCGGC
GGCTACTCAG TCTCCGCCCC GGACGGCTTC CTGATGGCCG GGAACGGCAC CGCACACCCA
ACCGAGATCG CCCGGCTCCG CGGCGCACGC CTCGTGGTGT GTTCGGAGCA GACCTCCGGC
CGACGCTTCG ACGAAGCCAA GGTCAAGAGG CTCACCGGCG GAGACCTCCT CACCGGGCGG
TTCATGCGCG GCGACTTCTT CGATTTTGAG CCGTCTCACC TGACCGTCGT CGCCACGAAT
CATCTGCCCG AAGTCATCGA AGGCGGACCC TCGTTCTGGC GCCGGGCCCG GCTGATCCCG
TTCGATCACG TGGTTCCGCC CGAGCGGCGT GACACGGAGC TACACACCAA GCTCCTGAGC
GCCGAAGGGC CGGCGATCTT GGGCTGGATG GTCCGCGGGG CGATGATCGT CATCGGAAGC
GGGCTGGTCG ACCCGCCCCG CGTGCTCGCC GCCACCGACG ACTACCGCAT CAGCGAGGAC
AGCCTCGCGT CGTTCGTCCG CGACGACTGC ATCGTCAACC CGCACGCCTG GTGCACGGTC
CCGGACTTCC GCACGCGCTA TGAGGCGCAC TGCGCGGAGA TGGGTGTGGA CCCGTTGTCC
GCGAAGGCGG TCACCACTCG GCTGACCAGG GAGTTTCCGG TGCAGTCCGA CCGTCTCTCC
CGCCCTTCCC GTCGGATCTA CCGCGGGATC GGGCTGGTCG ATGCGGACGC AGAGTCCGAC
GAAGAAACCG GCCGGTGA
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| Protein sequence | MTTPPLERFS NAYTAATGWG IDPTRAQQDV RCPAHEDGSP SLSVGAGHDG RVLLTCQAGC
DLDAILAAVE LATADLFPPR GEQAKPQIVA SYPYTDEQGT RLFTVHRKEP GRDGSRKEFV
QQAADGSWKT RGIRKPLYRL PEVVEAVKNG AVVWVVEGEK DADRLASLSL TATTCPQGAR
KWKAEHTDSL SGAADVRVIA DNDDPGRAHA AQVEAVLRPV VTSVSVWLPA AGKDVSDHLN
AGHGLDDLRP LAVDEGPAPG AASTAAASTV DAAELETDDA NALRLVAEYG NTIRRVSDMG
SWWRWTGKRW ERDHDDAHVR EAAKILARKL PAETLEQRKY KRASLSSTGL SGATRVAQSD
PRVTVLARDL DAHPHLLNTQ SGVVDLVTGA VKPHDPWLML TRITPLDVDT EATHPMWSEF
LAETFGGDTE LVAYVQSLCG LALLGDVREH VLPLMYGAGA NGKGVILLVL QGLLGIADTG
GYSVSAPDGF LMAGNGTAHP TEIARLRGAR LVVCSEQTSG RRFDEAKVKR LTGGDLLTGR
FMRGDFFDFE PSHLTVVATN HLPEVIEGGP SFWRRARLIP FDHVVPPERR DTELHTKLLS
AEGPAILGWM VRGAMIVIGS GLVDPPRVLA ATDDYRISED SLASFVRDDC IVNPHAWCTV
PDFRTRYEAH CAEMGVDPLS AKAVTTRLTR EFPVQSDRLS RPSRRIYRGI GLVDADAESD
EETGR
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