| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6219 |
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| Symbol | |
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| ID | 5674538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7553179 |
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| End bp | 7553835 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641245071 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001510467 |
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| Protein GI | 158317959 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.694772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGTCAC CGGCCGGCCA TGACCGCGAC GAGGTCGGCG CCGGTGAGCT GCTGCTCACT
TTGCGCGATC AGGGCTGGCC CAGCGGCGTG CGATCCCGCA ACGTGTCGCT CCGGCCCGAC
GGAGTTCGCT CGTACCTGTT CACGATCGCC AGAAACGTCA TCACCGACGC CTGGCGGGCC
GAGCGGCGAC GGCCGTCACT CGGCGACGAC GGCGGCGAGG TCGTGGCGGC CGCCCCCGCC
GTCGACGACG TGAGCCAGGC CATCGAGGAG TGGGTGGTCG CGGAGGCGCT AGGTCGTATT
TCGCTCGCGC ACCGGGCTGT CGTCCAAGAG CTGTACTACG AGGGAAGGTC GGTACGCGAG
GCGGCAGCCC GCCTGGAACT GCCAGAGGGC ACCGTCAAGT CCCGTGTCTA CTATGCGATC
CGCGCGCTGC GTGACGCCTT CGAGGAGATG ACGGTCGGTT CGCCGAACCC GCTCCCGGCG
CCTCGCGGCG GTCGCTGCTG TGCTCGTCCT GTGCGCCGGA ATCGGTCTCG TCGTGAACAG
TCCCTTTGCC AGCGCACCGA GTGGGCCCTC CACCTCCTTC GCACCGGAGG TCGCCAGCGT
CGACGGCATG ACGGAACGAG CGTCCAGCTG GTCGTCGACG CCGACAACGA AGGCTGA
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| Protein sequence | MGSPAGHDRD EVGAGELLLT LRDQGWPSGV RSRNVSLRPD GVRSYLFTIA RNVITDAWRA
ERRRPSLGDD GGEVVAAAPA VDDVSQAIEE WVVAEALGRI SLAHRAVVQE LYYEGRSVRE
AAARLELPEG TVKSRVYYAI RALRDAFEEM TVGSPNPLPA PRGGRCCARP VRRNRSRREQ
SLCQRTEWAL HLLRTGGRQR RRHDGTSVQL VVDADNEG
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