Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6210 |
Symbol | |
ID | 5674529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7544422 |
End bp | 7545948 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641245062 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001510458 |
Protein GI | 158317950 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.208526 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCTG ACAGCGCGAC CGCCGCCCCC GTGCGACCGG GCACCTCCGC GGCCCCGCCC ACGAGCCATC ACCTCGGCCT GGCTCTGTTC GTGATCGCCG CAGCACAGCT GGTGGTGGTC CTCGACGCCA CGATCACCAA CATCGCTCTA CCCAGCATCC AGACCGATCT CGACGTGTCC GACGCGAACC TGGCCTGGAT CGTCAACTCC TACGCGCTGG CCTTCGGTGG GCTGCTACTG CTCGGCGGAC GCACCGGCGA TCTCTTCGGC CGGCGACGGA TGTTTCAGAC CGGCATCGCG ATCTTTACGC TGGCCTCACT GCTGGGAGGA CTGGCCCCCA ACGAGGCCCT GTTGATCAGC GCCCGCGTCC TGCAAGGCAT CGGCGCCGCG CTCGCTGCCC CCAACGCGCT GGCCCTGATC ACTACGACAT TTCCACCCGG CAAGCCCCGC AATACGGCTA TGGGTGTGTA CGCCGCGATG GGAGGCGTCG GCGCCACAGT CGGTCTGCTG TTGGGCGGCA CACTCACCGA CGTCCTGAGC TGGCGATGGG TCTTCTTCAT CAACGTTCCC ATCGGCCTGG TCGTCCTCGT CGGAACCCGG AGCCTCGTCG AGGCCGAACG CGACCCGGGC CGCGTGGACG TCCCCGGCGC TGTCACGGGA ACGGGCGGCC TGATCGCACT GGTCTACGGC ATCACCCACG GCGGCGAGCA CGGCTGGAGC GACAGCGCCA CCCTGACCGC CTTCGCCGTG GCGGCCGTGC TATTGGTGGC GTTCCTTCTC ATCCAGGCCC GGACCGCCCA CCCGATGATG CCGCTACGGC TGTTCCAGGA CCGCAACCGG TCTGGTTCCT ACGCCACGAT GCTGCTCATC GGTGCCGGCA TGTTCGCGAC CTTCTACTTC CTGACGCTGT ACATGCAGCT CATCCTCGGC TACAGCCCCG TCCGGACCGG CTTCGCCTAC CTGCCCTTCA GCTTCGGCAT CGCCATCGCC GCCGGTGTCA GCTCCAAACT GGTCACCCAC GTCGCCCCAC GCGTGATCGC CGGACCGGGC CTGCTCGCGG CGGCCGCGGG CATGCTCTGG TTCGCCGCCC TCGATCCGGA CTCCCCGTAC GCCGGACACC TGATGCCGGC GATGTTCCTC ACCGGCCTCG GCCTCGGCCT GAGCTTCGTC CCCATGACAC TCGGCGCAGT CAGCGACGTT GCACACGAGG ACTCCGGGAT CGCCTCAGCA CTCCTGAACA CCGCCCAGCA GATCGGCGGA GCCCTCGGCC TCGCGGTCCT GTCAACCATC GCCACCTCCA CGGCCGACAA CAAGCTTCCC GAAGCCGCCG GAGCCCTCTA CCAAGGCCTG GCCACGAACG ACGTCATCCT GATCGCGAGA GCACAGGACG CACTGACCCA CGGCTACTCC ATGGCTTTCG CCGCCGCCGC CGCGATGTTC CTCGCCGGTC TGATCGTCAC CGCCACCGCC ATCAACACTG CCAGGCAACA CCACATCGAG GACGCGCCTC CCGCACACAT CGGCTGA
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Protein sequence | MSADSATAAP VRPGTSAAPP TSHHLGLALF VIAAAQLVVV LDATITNIAL PSIQTDLDVS DANLAWIVNS YALAFGGLLL LGGRTGDLFG RRRMFQTGIA IFTLASLLGG LAPNEALLIS ARVLQGIGAA LAAPNALALI TTTFPPGKPR NTAMGVYAAM GGVGATVGLL LGGTLTDVLS WRWVFFINVP IGLVVLVGTR SLVEAERDPG RVDVPGAVTG TGGLIALVYG ITHGGEHGWS DSATLTAFAV AAVLLVAFLL IQARTAHPMM PLRLFQDRNR SGSYATMLLI GAGMFATFYF LTLYMQLILG YSPVRTGFAY LPFSFGIAIA AGVSSKLVTH VAPRVIAGPG LLAAAAGMLW FAALDPDSPY AGHLMPAMFL TGLGLGLSFV PMTLGAVSDV AHEDSGIASA LLNTAQQIGG ALGLAVLSTI ATSTADNKLP EAAGALYQGL ATNDVILIAR AQDALTHGYS MAFAAAAAMF LAGLIVTATA INTARQHHIE DAPPAHIG
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