| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6193 |
|---|
| Symbol | |
|---|
| ID | 5674514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7525653 |
|---|
| End bp | 7526522 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641245045 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001510443 |
|---|
| Protein GI | 158317935 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0227024 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCACA TACAACCCTG TCTCGCCAAG TTGTTGGGCG CAATCGTCCA GCGCAGGAAG
GCCGCCGGGC TCAGCCAGGC CCAGCTGGCC AACCGGGTGC GTTACCAACC GAGTTACCTC
TCGAAGGCCG AGCGCGGCCT GCTGGGCGTG CCGTCGCAGT CGCTCGTGGC CGCGATCGAC
GCGGAGCTGA ACGCCGGCGG CGCGCTCGTC GAGCTGCGCC GTCACGCGTG GCTGGAGGAC
AAGGGCGGTC AGGCGGGCGT CATCTGGCGG GGAGTCCCGG AGGAGGTGGA CATCACGGAT
CGCCGACAGC TCATCGTCGG GGGCGGCGCC GTCGCGGTCG GGCCGGCGGC GGCCGCGGCC
CTGCCGGCCG TGCCAGCACT GTCCGACGCA CCGGCATCGT CGGGCGCGTC GGCCGTTCCC
GCGCCCCGGT CCGGAGCGGC CGGGCCCCCG GCACCGAGCC GGATCGACCT GTCGGGGCGG
TGGTGGACGT CCTGGCAGAC CTTCCGGGAC GGCAAGGAGG TCCGCTCCTC GCAGGAGGTC
AGCGTGGAGC AGGCCGGCGA GGTCCTCCGC ATCGGGGCGG TCTCGCGCGG GCTGGCCCTG
GAGGAGGGCG GCTACCTGTG GTCGGGCGAG CTGCGCGTCT TCGACAACGA GATCGTCATG
GGGTGGTACG TGGCGGTCGA CGGCCCGGTG CGGTCGAAGG GCACGCTGTT CCTCTCGCTG
CACCCGCACG GTGACCGGCT CACCGGCCGC TGGGTCGGCC TCAGCTACGA CGGCCTGTTC
ATCGAGGGGT GGGGAGCGAT GGCTCGTTCG GAGGAGGCCA CCGTGACCCT GATCGACCGC
CTCAAGAAAC AGTTTCCGAA GGTGGCGTGA
|
|---|
| Protein sequence | MKHIQPCLAK LLGAIVQRRK AAGLSQAQLA NRVRYQPSYL SKAERGLLGV PSQSLVAAID
AELNAGGALV ELRRHAWLED KGGQAGVIWR GVPEEVDITD RRQLIVGGGA VAVGPAAAAA
LPAVPALSDA PASSGASAVP APRSGAAGPP APSRIDLSGR WWTSWQTFRD GKEVRSSQEV
SVEQAGEVLR IGAVSRGLAL EEGGYLWSGE LRVFDNEIVM GWYVAVDGPV RSKGTLFLSL
HPHGDRLTGR WVGLSYDGLF IEGWGAMARS EEATVTLIDR LKKQFPKVA
|
|---|
| |