Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6176 |
Symbol | |
ID | 5674497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7505977 |
End bp | 7506720 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641245028 |
Product | winged helix family two component response transcriptional regulator |
Protein accession | YP_001510426 |
Protein GI | 158317918 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.186762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGTCG TCCTTTTGCT CACCAACGCC CCCGGTCCGT CAGCCGAGTC CTTCCCGTCA CTCGGCCTGC TCACGCACAC GGTCCGGGTG GCACCCCTGG AGGCAAGCGC ACTGCTCGAC GCACCGCCGG TCGATGTGAT CGTCGTCGAC GGCCGCCGTG AGCTCGTGAT CGCGCGAGGC CTGTGCCGGC TGCTGCGCAC CACCGGGCTC ACCACCCCGC TGCTCGCCCT TGTCACCGAG GGTGGGCTCG CCGCCGTGTC GGCGGACTGG GGCGTCGACG ACGTGGTCCT CGACACCGCG GGTCCAGCCG AGGTCGAGGC GCGGCTGCGC CTGGCCATCG GGCGGGTCGC CGCCGCCGGC GGTACGGCCG AGGCCGGGGT CATCCGGTCC GGCGACCTGT CGGTCGACGA GACCACCTAC TCCGCCAAGC TGCGTGGACG TCCGCTCGAG CTCACGTTCA AGGAGTTCGA GCTGCTCAAG TACCTCGCGC AGCACCCGGG GCGGGTCTTC ACCCGCGCGC AGCTCCTGCA GGAGGTCTGG GGCTACGACT ACTACGGCGG CACCCGCACG GTTGACGTGC ACGTCCGCCG GCTGCGGGCG AAGCTCGGGC CCGAGCACGA GGCGATGATC GGAACCGTCC GCCACGTGGG CTACAAGTTC GTGGCGCCGC CGATCTCGCC GCTGCCCGAG TCCGGTGCCA ACCGTATGGA CCGGGACGAC ATCCGCACCC CCGAGCGCGT CTGA
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Protein sequence | MSVVLLLTNA PGPSAESFPS LGLLTHTVRV APLEASALLD APPVDVIVVD GRRELVIARG LCRLLRTTGL TTPLLALVTE GGLAAVSADW GVDDVVLDTA GPAEVEARLR LAIGRVAAAG GTAEAGVIRS GDLSVDETTY SAKLRGRPLE LTFKEFELLK YLAQHPGRVF TRAQLLQEVW GYDYYGGTRT VDVHVRRLRA KLGPEHEAMI GTVRHVGYKF VAPPISPLPE SGANRMDRDD IRTPERV
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