Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6115 |
Symbol | |
ID | 5674436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7441576 |
End bp | 7443090 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641244967 |
Product | UbiD family decarboxylase |
Protein accession | YP_001510365 |
Protein GI | 158317857 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.612596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.345473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAGCGCC CTGGGACAGG GTACGACCAG CGGCCCTTCG TCGGCGCTGC AAAGATGGAC GCCATGGCCT GGGCCGATCT CCGCGCGTTC CTCGCTCACC TCGACCGGAG CGGGGACCTT CGCCGGGTGC GGGTTCCCGT CGATCCCCGC CTGGAGGTGA CCGAGATCGT CACCCGGGTC GTCCGCGAAC GCGGCCCGGC ACTGCTCTTC GACAAGCCCC TCGGTTCCGA CATGCCGCTG GCGATCAACG TGTTCGGCAC CGAGGCCCGG ATGGCCGCGG CGCTCGGCGT CGACCGCCTC GACGACGTCG GCACGCGCAT CGGCGAGATG CTGCGCCCCG AGCTGCCAGT CGGCTTCGGC GGCCTGCGTG GCGCGCTCGG CAAGGCCGCG CAGCTCACCT CCCTGCCGCC GCGCAAGGTC CGCACCGCTC CCTGCCAGGA CGTCGTCCTC AAGGGCTCGG ACGTCGACCT GAACCTGCTG CCCGGCGTGC ACGCCTGGCC GCGTGACGGC GGGCCGTTCC TCAACCTGGG GCTGACCCAC ACGAAGCATC CCGAGACCGG GGCGCGCAAC CTCGGCATGT ACCGGCTGCA GCAGCACGAC GCCCGCACCG TCGGCATGCA CTGGCAGATC CACAAGGACT CCAACGCCCA CCACGCCGTC GCCGAGCGGC GCGGCGAGCG GCTGCCGGTC GCGATCGCGT TCGGCTGCGA CCCCGCTGTC ACCTACGCGG CGTCCGCCCC GCTGCCCGCC GAGATCGACG AGTACCTGTT CGCCGGCTTC CTGCGCCGCG AGCGCGTCGA GATGGTCGAC TGCCTGACCG TCCCGCTCCA GGTGCCGGCG AACGCCCAGG TCGTGCTCGA GGGCTGGCTC GAGCCCGGCG AACGGCTGCC CGAAGGCCCC TTCGGAGACC ACACCGGCTT CTACACGCCG ATCGAGCCGT TCCCCGCGCT GCACGTCGAC GTGATGACCA TGCAGCGCGA CCCGGTCTTC CAGAGCATCG TGGTCGGACG TCCACCGCAG GAGGACGGGC CGATGGGCAA GGCGACCGAG CGCATCTTCC TGCCGCTGAT CCGGATGATG ATCCCCGAGA TCGTCGACTA CGACCTGCCC GAGGCCGGGG TCTTCCACAA CTGCGCGATC GTCTCGATCG AGAAGCGGTT CCCCAAGCAC GCCCAGAAGG TGATGAACGC GGTCTGGGGC GCGGGCCTGC TCTCGCTGTC GAAGCTGATC GTCGTCGTCG ACGCCGACTG TGACGTCCAC GACTACCACG AGGTCGCCTG GCGGGCGTTC GGCAATGTGG ACTACGCGCA CGATCTGCTC ACCACGGTGG GCCCGGTCGA CCACCTCGAC CACGCCTCCT ACGAGCAGTT CTACGGCGGC AAGGTCGGGG TCGACGCGAC CCGCAAGCTG CCCACCGAGG GATACCGGCG CGACGGCGGA TGGCCCGAGG AGATCGTCAT GGATGAGGCC GTCCGGGACA GGGTGACGCG TCGGTGGAAG GAGTACGGCC TGTGA
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Protein sequence | MERPGTGYDQ RPFVGAAKMD AMAWADLRAF LAHLDRSGDL RRVRVPVDPR LEVTEIVTRV VRERGPALLF DKPLGSDMPL AINVFGTEAR MAAALGVDRL DDVGTRIGEM LRPELPVGFG GLRGALGKAA QLTSLPPRKV RTAPCQDVVL KGSDVDLNLL PGVHAWPRDG GPFLNLGLTH TKHPETGARN LGMYRLQQHD ARTVGMHWQI HKDSNAHHAV AERRGERLPV AIAFGCDPAV TYAASAPLPA EIDEYLFAGF LRRERVEMVD CLTVPLQVPA NAQVVLEGWL EPGERLPEGP FGDHTGFYTP IEPFPALHVD VMTMQRDPVF QSIVVGRPPQ EDGPMGKATE RIFLPLIRMM IPEIVDYDLP EAGVFHNCAI VSIEKRFPKH AQKVMNAVWG AGLLSLSKLI VVVDADCDVH DYHEVAWRAF GNVDYAHDLL TTVGPVDHLD HASYEQFYGG KVGVDATRKL PTEGYRRDGG WPEEIVMDEA VRDRVTRRWK EYGL
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