Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6062 |
Symbol | |
ID | 5674383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7380548 |
End bp | 7381369 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641244910 |
Product | NusG antitermination factor |
Protein accession | YP_001510312 |
Protein GI | 158317804 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.275139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCCAGT CTCCCGAGCA CGCCTCCTCC GAGCAGGGAG AGGCCCTCGA CCGTCTCGAC CCCCTTGCGG CGTTCGAGCG CGACGAGGTC GCGAGCACGG ACGCCGCGGC CGCACCTGAG AAGGACCACC TCGAGGACGA CCTCGGGCCC GACGGCGGCT CCACCGCCGA CACGCCCGCG ACGGCGGCCG ATGCCGCGCC GGCCGCTGAC GCCGTGCCGG CCACCGCGGT CGCGACGCCC GAGCCTCAGG ATGACGGCGA CGACCTGCTC CGGGCGCTCG AGGACGCTCC TGGCGAGTGG TACGTCGTGC ACTCCTACGC GGGCTACGAG AACAAGGTCA AGACCAATCT CGAGACCCGG ATCTCAAGCC TCAACATGGA GGACTACATC TTCCAGATCG AGGTCCCGAC CGAAGAGGTC CCGGTCGTCA AGAACGGCAA GCGCCAGCTC GTCCAGCAGA AGAAGTACCC CGGCTACATC TACGTCCGGA TGGATCTGAC CGACCAGTCC TGGTCGGCGG TCCGCAACAC GCCGGGTGTG ACCGGGTTCG TGGGCCTGAC GAACCGGCCG TCGCCGCTGC GCCGCGAGGA GGTCGTCTCC ATCCTCGCGC CGGCGGCGCC GAAGGAGAAG AAGGTCGAGA CGGTCAAGGC CCAGGAGTTC GAGGTCGGGG AGTCCGTCAC CGTCATGGAC GGCCCGTTCG CCACCCTGCC GGCCACCATC AGCGAGATCA ACCTCGACGC GCAGCGCCTG AAGGTACTCG TCTCCATCTT CGGTCGGGAG ACACCGGTCG AGCTCCAGTT CAACCAGGTC GCGAAGATCT GA
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Protein sequence | MSQSPEHASS EQGEALDRLD PLAAFERDEV ASTDAAAAPE KDHLEDDLGP DGGSTADTPA TAADAAPAAD AVPATAVATP EPQDDGDDLL RALEDAPGEW YVVHSYAGYE NKVKTNLETR ISSLNMEDYI FQIEVPTEEV PVVKNGKRQL VQQKKYPGYI YVRMDLTDQS WSAVRNTPGV TGFVGLTNRP SPLRREEVVS ILAPAAPKEK KVETVKAQEF EVGESVTVMD GPFATLPATI SEINLDAQRL KVLVSIFGRE TPVELQFNQV AKI
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