| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6053 |
|---|
| Symbol | |
|---|
| ID | 5674374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7365998 |
|---|
| End bp | 7366468 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641244901 |
|---|
| Product | 30S ribosomal protein S7 |
|---|
| Protein accession | YP_001510303 |
|---|
| Protein GI | 158317795 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.237559 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCA AGGGGCCCGC GCCCAAGCAC CCCGTCGTCG TCGATCCGGT CTACGGCTCG
CCGCTGGTGA CCGCTCTGGT CAACAAGGTG CTGCTGAGCG GCAAGAAGTC GGTCGCGGAG
CGCATCGTGT ACGGCGCGCT CGAGGGCGCC AAGAACAAGA CCGGCAACGA CCCGGTCGTC
ACGCTCAAGC GTGCGCTGGA CAACGTCAAG CCCACGCTGG AGGTGCGCAG CCGCCGAGTA
GGTGGCGCCA CCTACCAGGT GCCGGTCGAG GTCCGCGCGG GCCGCAGCAC CACGCTCGCG
CTGCGCTGGA TCGTCGGGTA CTCCCGCGGC CGTCGTGAGA AGACGATGAC CGAGCGCCTG
ATGAACGAGC TGATCGACGC GAGCAACGGC CTCGGCGCGA GCGTGAAGCG CCGGGAGGAC
ACCCACAAGA TGGCGGAGTC CAACAAGGCC TTCGCCCACT ACCGCTGGTA A
|
|---|
| Protein sequence | MPRKGPAPKH PVVVDPVYGS PLVTALVNKV LLSGKKSVAE RIVYGALEGA KNKTGNDPVV
TLKRALDNVK PTLEVRSRRV GGATYQVPVE VRAGRSTTLA LRWIVGYSRG RREKTMTERL
MNELIDASNG LGASVKRRED THKMAESNKA FAHYRW
|
|---|
| |