| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6049 |
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| Symbol | rplC |
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| ID | 5674370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7361302 |
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| End bp | 7362012 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641244897 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001510299 |
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| Protein GI | 158317791 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.185718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.220559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCAACC GCAATTACAG AGGGCTCCTG GGCACCAAGC TCGGGATGAC CCAGGTATGG
GACGCGAACA ACCGCGTCGT GCCGGTCACC GTCATCCAGG CCGGCCCCAA CGTCGTGACC
CAGGTCAAGA CACCCGACTC CGACGGCTAC TCGGCCGTCC AGCTCGGCTA CGGCGAGATC
GACCCGCGTC GGATCAACAA GCCGATGCGT GGCCACTTCG AGACCTCCGG TGCCACTCCC
CGGCGGCACC TCGTCGAGCT GCGCACCGCG GATGCCGGCA ACTACCGGCC CGGCCAGCAG
CTGACCGGTG AGGTGTTCGA CGCCGGCCAG GTGGTCGACG TCACCGGCAC CTCCAAGGGC
AAGGGCTTCG CCGGTGTCAT GAAGCGGCAC GGCTTCAAGG GCCTGGGCGC CGGTCACGGC
GTCGAGCGCA AGCACCGCTC GCCGGGTTCC GTCGGCGGCT GCGCCACTCC GGGGCGGGTC
TTCAAGGGCC TGCGGATGGC CGGCCGGATG GGGCACGACC GTGTGACCGT GGCCGGGCTG
ACCATCCACG CCGTCGACAC CGAGCGCGGC TTCCTGCTGA TCAAGGGTGC GATTCCCGGC
CCCGACGGCG GTCTGGTCTT CGTTCGCAGC GCGGCCAAGC GCCCCGCTCC GGAGCCGGCC
GCTCCGGTGG CGGCCGCGGC CGCCGGCACC GGTGAGGAGG CCTCGGCATG A
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| Protein sequence | MLNRNYRGLL GTKLGMTQVW DANNRVVPVT VIQAGPNVVT QVKTPDSDGY SAVQLGYGEI
DPRRINKPMR GHFETSGATP RRHLVELRTA DAGNYRPGQQ LTGEVFDAGQ VVDVTGTSKG
KGFAGVMKRH GFKGLGAGHG VERKHRSPGS VGGCATPGRV FKGLRMAGRM GHDRVTVAGL
TIHAVDTERG FLLIKGAIPG PDGGLVFVRS AAKRPAPEPA APVAAAAAGT GEEASA
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