| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6048 |
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| Symbol | rplD |
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| ID | 5674369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7360562 |
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| End bp | 7361305 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641244896 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001510298 |
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| Protein GI | 158317790 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.239817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCGA CGGCAACGAT GACGAAGGAA GCCCCCGCCG AGGCGGACGC GCCGGTGGAC
CGCACGGTCC CGGTGCACGC CCCCGCGGGC GGCGACGCCG GCAGCGTCGA GCTGCCCGGC
GCGGTGTTCG ACGTGCCGGT GAACGTGCCG CTGATCCACC AGGTCGTCGT GGCGCAGCTC
GCCGCGGCCC GGCAGGGCAC GCACTCCACC AAGACCCGCG GCGAGGTCCG TGGCGGTGGG
CGCAAGCCGT ACCGCCAGAA GGGCACCGGC CGGGCACGGC AGGGCTCGCT GCGCGCGCCG
CAGTTCACCG GCGGTGGCAT CGTCCACGGC CCGACGCCGC GCAACTACGA CCAGCGGACA
CCCAAGAAGA TGAAGGCCGC CGCGCTGCGC GGGGCCCTGT CGGACCGGGC CCGCAACAAC
CGGCTGCACG TGGTCTCATC GCTGGTCGCC GGTGACACCC CGTCGACCAA GTCGGCTGTG
GCCGCGCTGA CCAGCCTGGT GGACGCGCGC CGTGTCCTGG TCGTGGCCCT CCGCTCGGAC
GAGCTGACCT GGCTCAGCCT GCGCAACGTG GCCGAGGTCC ACCTGCTCGA CCCGGGCCAG
CTCAACACCT ACGACGTGCT GGTGAGTGAC GATGTGGTGT TCACCGAGGG CGCGCTCGCC
GCGTACCTCG GTCGCGCCTC CCGTCCGGCG GCTGACACCG GCAGCCTGGC CGGCAGCCCG
GCCGGCGAGG AGGAGGACAA GTGA
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| Protein sequence | MSPTATMTKE APAEADAPVD RTVPVHAPAG GDAGSVELPG AVFDVPVNVP LIHQVVVAQL
AAARQGTHST KTRGEVRGGG RKPYRQKGTG RARQGSLRAP QFTGGGIVHG PTPRNYDQRT
PKKMKAAALR GALSDRARNN RLHVVSSLVA GDTPSTKSAV AALTSLVDAR RVLVVALRSD
ELTWLSLRNV AEVHLLDPGQ LNTYDVLVSD DVVFTEGALA AYLGRASRPA ADTGSLAGSP
AGEEEDK
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