Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6046 |
Symbol | rplB |
ID | 5674367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7359377 |
End bp | 7360210 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641244894 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_001510296 |
Protein GI | 158317788 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.966383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.220559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTATTC GTAGGTACAA GCCGACGACG CCGGGGCGTC GTGGCTCGAG CGTCGCGGAC TTCGTCGAGA TCACGCGTGA TCACCCGGAG AAGTCGCTCG TCCGCCCGCT GCACTCCAAG GGCGGCCGCA ACGTCCACGG GCGGATCACG ACCCGGCACC AGGGCGGCGG TCACAAGCGC GCCTACCGGA TCATCGACTT CCGGCGGGAC AAGGACGGCG TGCCGGCCAA GGTCGCGCAC ATCGAGTACG ACCCGAACCG CACCGCGCGG ATCGCCCTGC TGCACTACGT CGACGGCGAG AAGCGCTACA TCCTCGCCCC GGTGAAGCTG CACCAGGGCG ACATGGTCAG CTCGGGTGTC GGCGCGGACA TCAAGCCGGG CAACGCCCTG CCGCTGCGCA ACATCCCGAC CGGCACCGTG GTGCACGCCA TCGAGCTGCG TCCCGGCGGC GGCGCCAAGA TCGCCCGCAG CGCCGGCGCC AGTGTGCAGC TCGTCGCGAA GGACGGCCCG TACGCCCAGC TCCGGATGCC CTCCGGTGAG ATCCGCAACG TCGACGTGCG CTGCCGCGCC ACCGTCGGCG AGGTCGGCAA CGCCGAGCAG AGCAACATCA ACTGGGGCAA GGCCGGCCGC ATGCGCTGGA AGGGCCGTCG GCCCACCGTG CGTGGTGTCG CGATGAACCC GGTCGACCAC CCGCACGGTG GTGGTGAGGG CAAGACCTCC GGTGGCCGCC ACCCGGTCAA CCCGAAGGGC CGTCCGGAGG GCCGCACCCG CCGCACCAAG AAGTCCAGCG ACGCGCTGAT CGTCCGGCGC CGCAAGCAGA ACAGGCGGCG CTAG
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Protein sequence | MGIRRYKPTT PGRRGSSVAD FVEITRDHPE KSLVRPLHSK GGRNVHGRIT TRHQGGGHKR AYRIIDFRRD KDGVPAKVAH IEYDPNRTAR IALLHYVDGE KRYILAPVKL HQGDMVSSGV GADIKPGNAL PLRNIPTGTV VHAIELRPGG GAKIARSAGA SVQLVAKDGP YAQLRMPSGE IRNVDVRCRA TVGEVGNAEQ SNINWGKAGR MRWKGRRPTV RGVAMNPVDH PHGGGEGKTS GGRHPVNPKG RPEGRTRRTK KSSDALIVRR RKQNRRR
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