Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6031 |
Symbol | rpmD |
ID | 5674352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7352741 |
End bp | 7352926 |
Gene Length | 186 bp |
Protein Length | 61 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641244879 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_001510281 |
Protein GI | 158317773 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.13747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCAAGC TGCGTATCAC CCAGATCCGC TCCGGGATCG GCGGTACCCG CAACCAGCGC GAGACGCTGA GGACGCTGGG GCTGCGTAAG ATCAACGCGA GCACCGTCCG TGACGACCGT CCCGAGGTTC TCGGGATGAT CGCGACCGTG ACCCATCTCG TCCGGGTCGA GGAGGTGGAC TCCTGA
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Protein sequence | MAKLRITQIR SGIGGTRNQR ETLRTLGLRK INASTVRDDR PEVLGMIATV THLVRVEEVD S
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