Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6029 |
Symbol | secY |
ID | 5674350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7350558 |
End bp | 7351850 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641244877 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_001510279 |
Protein GI | 158317771 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.175346 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTCACCG CCTTCACGCG GGCCTTCCGC ACGCCCGACC TGCGGAAGAA ACTGCTCTTC ACCCTCGGCG TCGTCGTCCT GTTCCGGTTC GGCAGCGTCA TGCCGTCGCC CGGCGTCTCC ACGGCGGCGG TGAACGCGTG TCTGGACTCG GCCAGCGCCG AAAGCAACAA CGTGTACTCG CTGATCAACC TCTTCAGCGG TGGCGCTCTC CTTCAGCTCT CGGTGTTCGC GCTCGGCATC ATGCCGTACA TCACCTCCAG CATCATCATC CAGCTTCTGG TGGTGGTGAT TCCGCGGCTC GAGCAGCTCA AGAAGGAAGG CAGCTCGGGT GAGCAGAAGC TCACCCAGTA CACCCGTTAC CTGACGGTCG CCCTGGGCAT CCTCCAGGCC ACCGGCATCG TGGCGCTCGC CCGCAGCGGC CGGCTCTTCC CTGGCTGCAG CGCCCAGATC ATCCCGGACA CGAGCCTCTT CCGCATCGTC ACCATCGTGA TCACTATGAC CGCTGGAACC GCGGTCATCA TGTGGATGGG TGAGCTGATC ACCGCCCGCG GCGTGGGCAA CGGCATGTCC CTGCTGATCT TCACCTCGAT CGCGGCGGCC CTGCCCTCCC AGGGCGGACG GATCCTCCAG GTCGCCGGTG GCGTCGTGTT CGGTCTCGTG ATCCTGCTCG GTCTGGCCAT CGTCGTGTTC GTAGTGTTCG TCGAACAGTC GCAGCGCCGC ATCCCGGTGC AGTACGCGAA GCGGCTGATC GGGCGCCGGA TGTATGGCGG AACGTCGACC TACCTCCCGA TCAAGGTGAA CCAGGCCGGC ATCATCCCGG TCATCTTCGC CTCCTCGCTG CTCCAGCTCC CACAGCTCGT GGGCCAGGTG TGGAGCAACC AGACCTTCCA GGACTTCGAG CAGCGCTACC TGTCGCGCGG GGACCACCCG CTCTACCTCG TGGCCTACGG TGCGCTGATC ATCTTCTTCA CGTACTTCTA TGTCGCGATC ACCTTCAACC CGACGGAGGT CGCCGACAAC ATGAGGAAGT ACGGCGGGTT CATCCCCGGG ATCCGACCCG GCCGGCCCAC GGCCGAATAC CTGGATCACG TGCTGTCCCG CATCACCCTC CCTGGCTCGC TGTTCCTGGG GGTCATCACG GTGTTGCCGT TGGCGCTTCT CAACCTGACG AAGGACCAGC CCTTCCCGTT TGCTGGTACC TCGGTTCTGA TCATGGTGGG AGTGGGGCTG GAGACCGTGA AACAGATTGA AAGCCAGCTC ATGCTGCGCA ACTACGAAGG ATTCCTCCGG TAG
|
Protein sequence | MLTAFTRAFR TPDLRKKLLF TLGVVVLFRF GSVMPSPGVS TAAVNACLDS ASAESNNVYS LINLFSGGAL LQLSVFALGI MPYITSSIII QLLVVVIPRL EQLKKEGSSG EQKLTQYTRY LTVALGILQA TGIVALARSG RLFPGCSAQI IPDTSLFRIV TIVITMTAGT AVIMWMGELI TARGVGNGMS LLIFTSIAAA LPSQGGRILQ VAGGVVFGLV ILLGLAIVVF VVFVEQSQRR IPVQYAKRLI GRRMYGGTST YLPIKVNQAG IIPVIFASSL LQLPQLVGQV WSNQTFQDFE QRYLSRGDHP LYLVAYGALI IFFTYFYVAI TFNPTEVADN MRKYGGFIPG IRPGRPTAEY LDHVLSRITL PGSLFLGVIT VLPLALLNLT KDQPFPFAGT SVLIMVGVGL ETVKQIESQL MLRNYEGFLR
|
| |