Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6005 |
Symbol | |
ID | 5674326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7323946 |
End bp | 7324968 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641244853 |
Product | metalloendopeptidase glycoprotease family |
Protein accession | YP_001510255 |
Protein GI | 158317747 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0902481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.147252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGACAC CGGCCCGACC GCTGGTGCTG GGCATCGAGA CCTCGTGCGA CGAGACCGGC GTCGGCCTCG TCCGTGGCGG CGAGTTGCTC GCCGACGCGC TCGCCTCCTC GGTCGACGAG CACGCCCGGT ACGGCGGCGT GGTGCCCGAG ATCGCCGCGC GGGCGCACCT GGAGGCGATG GTCCCGACGA TCGAGCTGGC GTTGGACCGC GCCGGCCTGC GCCCCCGGGA CGTCGACGCC GTCGCGGTGA CATCCGGCCC GGGGCTGGCC GGCGCGCTGC TGGTCGGGGT CGCCGCGGCG AAGGCGTACG CGCTGGCGCT GGGTGTCCCG CTGCACGGGG TGCACCATCT CGCCGCGCAC GTCGCCGTCG ACACGCTTGA GCACGGCCCG CTGCCGCGCC CGGCGGTGGC GCTGCTGGTC TCTGGTGGGC ACAGCTCGTT GCTGCTGGTC CCCGATCTCG CGGCCGAGCC GGTCGAGTCG CTGGGGGCCA CGGTGGACGA CGCCGCGGGG GAGGCCTACG ACAAGGTCGC CCGGTTGCTC GGCATGCCGT TCCCGGGTGG CCCGCCGATC GACGCGGCGG CCCGCGAGGG CAGCCCGCGC ATCCCGTTCC CGCGCGCCAA GGCGGGGGAC GGCACGTTCG ACTTCTCCTT CTCCGGGCTC AAGACCGCGG TCGCCCGCTG GGTGGAGGCC CGGCGGCGGG CCGGCGAGCC CGTGCCGGTC GCGGATGTCG CGGCGTCGTT CCAGGAGGCC GTGGCGGACG TGCTCACCGC GAAGGCGGTC GCGGCCTGCC GGGCGCACGG TGTGGACACC CTGGTGGTCG GGGGCGGTGT CGCGGCCAAC AGCCGGCTGC GCGTGCTCGC CGCGCTGCGC TGCGAGGCGG CGGGCATCAC GCTGCGGATC CCGCGGCCGG GGCTGTGCAC CGACAACGGC GCGATGGTCG CGGCGCTCGG GTCGCTGCGG GTCGAGGCCG GCGTCGAGCC CTCGCCGCTG GACCTTCCCG CGTCCTCCAC GCTCGCCCTC TGA
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Protein sequence | MRTPARPLVL GIETSCDETG VGLVRGGELL ADALASSVDE HARYGGVVPE IAARAHLEAM VPTIELALDR AGLRPRDVDA VAVTSGPGLA GALLVGVAAA KAYALALGVP LHGVHHLAAH VAVDTLEHGP LPRPAVALLV SGGHSSLLLV PDLAAEPVES LGATVDDAAG EAYDKVARLL GMPFPGGPPI DAAAREGSPR IPFPRAKAGD GTFDFSFSGL KTAVARWVEA RRRAGEPVPV ADVAASFQEA VADVLTAKAV AACRAHGVDT LVVGGGVAAN SRLRVLAALR CEAAGITLRI PRPGLCTDNG AMVAALGSLR VEAGVEPSPL DLPASSTLAL
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