Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5969 |
Symbol | |
ID | 5674290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7272671 |
End bp | 7273900 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641244817 |
Product | geranylgeranyl reductase |
Protein accession | YP_001510219 |
Protein GI | 158317711 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.365894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.508891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCATCC ACGCACCCAG CCCCGTCCAC TCCGCCGTTC CCGGCACCGG GAACGGGCCG CCGGTAGACC TGCTCGTGGT GGGCGGCGGC CCGGCGGGCA GCTCGGCTGC GCTGCGGGCG CTGCAGCTGC GGCCCGACGC CCGGGTCGTG ATCGTCGACG CCGCGGACTT CCCCCGCGAC AAGACCTGCG GGGACGGCAT CGCACCGCAC GGCGTGGACG TCCTGCGCGC GCTGGGCATC ACCGACGCGA CCAGCGGGTA CCGCCCGGTG GACCGGATGC GCCTGCGCAC GCCTGGCGGT GCCGAGGTCG CCACGCCGTC CGAGCGGGCC ACGCACGTGA TCCCGCGGGA GGTCTTCGAC GCCCGCCTCG TCGCCGCCGC GCGCGCCCGC GGCGCCGAGT TCCTCCGGCG GCGGGTGCGC TCGCTGGAGG TCACCGCCGG CGGCGGGGGC GAGCCGGTGG TCACCGTGGA CGGCGGCGTG CTGCGCGCAC GGGTCGTCGT CGGCGCGGAC GGCGCGAACT CGACCGTGCG CCGGGCGCTG GGCATCGCGC CGAACCCGCC CGAGGGTCTG GCGATCGCCG TCCGCGCCTA CGCGGACGCA CCCAAGGACG ACCGCCCGCC CGAGCAGCTC ATCGAGATGA CGGACGAGGG CTGGCCGGCC TACGCCTGGT CGTTCCCGAT CGGGGACGGC CGGGCCAACA TCGGGTACGG CATGCTCCGC TCGCGGCTGC GCGCGGCGGG CACGACACCG AAGGCCGTCC TGCACGGGAC GCTGGCCCGG CTGCTGCCGG ACACCCCCGC CTACGAAGGC ACCCTGCGCG CGCACCACCT GCCGCTGTCC ACGCACCGCC CACGGCTGCC GGACGGCCCC GTGCTCCTCG CCGGGGACGC CGCGTCGCTG ATCAATCCGT TGACCGGCGA GGGCATCTAC TACGCGCTGC TGTCGGGATC GCTGGCCGGC CAGGCGGCGA TCACCGACCC GGGGCCGGCC GCCGGGCGGG CCTACCGACG CGCCCTGGAC GGCGAGCTGG GCAGGCACCT GCGGCACACG TCGCTGCTCG CCGGGCTCGC CGGCCGCCAC CGCCCGCTGA TGGACGCCGC GGTCCGCTCC GCCAGCCGCC GCACCGAGCT GTACGACAGC CTCGTCGAGA TCGGGCTGGG TAAGGGGACG ATCCCGGCCG CGTCACTGGC CCGGCTCGGG CTGCGGCGTG TGTTCACCGC GGCGCGCTGA
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Protein sequence | MPIHAPSPVH SAVPGTGNGP PVDLLVVGGG PAGSSAALRA LQLRPDARVV IVDAADFPRD KTCGDGIAPH GVDVLRALGI TDATSGYRPV DRMRLRTPGG AEVATPSERA THVIPREVFD ARLVAAARAR GAEFLRRRVR SLEVTAGGGG EPVVTVDGGV LRARVVVGAD GANSTVRRAL GIAPNPPEGL AIAVRAYADA PKDDRPPEQL IEMTDEGWPA YAWSFPIGDG RANIGYGMLR SRLRAAGTTP KAVLHGTLAR LLPDTPAYEG TLRAHHLPLS THRPRLPDGP VLLAGDAASL INPLTGEGIY YALLSGSLAG QAAITDPGPA AGRAYRRALD GELGRHLRHT SLLAGLAGRH RPLMDAAVRS ASRRTELYDS LVEIGLGKGT IPAASLARLG LRRVFTAAR
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