| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5966 |
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| Symbol | |
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| ID | 5674287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7269782 |
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| End bp | 7270954 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641244814 |
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| Product | ribonuclease BN |
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| Protein accession | YP_001510216 |
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| Protein GI | 158317708 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN)
[TIGR00766] ribonuclease, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.172061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGGAC CACGGGAAGC GGTGAAGACG GGCGTGGGAA CGGTGAGCGG CGCCGCGGGC
GCGGTGCGGC GCCGTCGCCC GTTCATTGAC CACACGGTGC GTGCGTACGG CCGCTATACG
TCGGACGGCG GTGACCGGCT CGCCGCGTCC ACGACATATT TCGCTTTCCT GTCCTTCTTC
CCGATCGTGG CGCTGGTCTT CTCGATCGCC GGGTTCGTCG TGGACGCCTA TCCCGACGCC
CAGGCCAAGC TCACCGAACA GATCAACGAC TATCTGCCCG GCCTGGCCGA CAAACTGGAC
GTCTCGACCA TCGGCCATGC GAAGGTCGGC GCCGGTCTGA TCGGTCTCGC CGGTCTCCTC
CTGGCCGGGC TGGCCTGGGT CTCGGCGCTG CGCGACAGCA TCCGGCTCGT CTGGCACCAG
AGCCTGGAGA CCGGCAACTT CATCATGCAG CGCCTGCGGG ACATCGCGAT CCTCACCGGT
CTCGGCCTGA CCCTGCTCGC CTCGCTCGTC GTCACCAGCC TGGCGACGTC CGCGACCGGG
GTGTTCCTGC GCTGGGTCGG GCTGGAGGGG AGCACGGCCG CCGCCTGGGC CACCGGGCTG
CTCGCGCTCA TGGTCGCGCT CGCCATCGAT GCCGCCGTGT TCGTCTACAT CTTCTGGCGG
TTGCCGGAAC GCACCAACCG GCAGCGGGTG CTGCGCGCGG CCGCGCTGGG CGCGGTGGGC
ATCGAGCTGC TCAAGCTGCT CGGGACCTGG CTGGTCGGTC AGACCACGTC CAACCCGGTC
TACGGCATCT TCGCGGTCAT GGTCGGCCTG CTCATCTGGA TCAACATCGT GATGCGCTGG
ATGCTGTTCG TCGCCGCCTG GGCGGTGACG GCACCGTACG CGTCGGACGT CCATCCGTCC
GGTACCGCCC CGGCGGACCC GGCGGGCCCC GACGTTGCCG GGGCGGACGG GCCCGGGCCG
GAGGGGGACC GCGTTGCCCC CGAGCCGCCG GCCGTCCGTG TCGAGCCGCC GGCCGTCCGG
TCCGCGCGAT CCGGGCGTGA CGACCGGAGC ACCCACGACG ATCACGATGG CCACGATGGC
CACGGCGGCG AGGACGGCCG CTCCTGGCGA CCGCGATGGC CCTGGCGGCG CGGCGCGGCG
CGCCCGGCGG ACCGGGCGCC GGTCGGGCGC TGA
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| Protein sequence | MTGPREAVKT GVGTVSGAAG AVRRRRPFID HTVRAYGRYT SDGGDRLAAS TTYFAFLSFF
PIVALVFSIA GFVVDAYPDA QAKLTEQIND YLPGLADKLD VSTIGHAKVG AGLIGLAGLL
LAGLAWVSAL RDSIRLVWHQ SLETGNFIMQ RLRDIAILTG LGLTLLASLV VTSLATSATG
VFLRWVGLEG STAAAWATGL LALMVALAID AAVFVYIFWR LPERTNRQRV LRAAALGAVG
IELLKLLGTW LVGQTTSNPV YGIFAVMVGL LIWINIVMRW MLFVAAWAVT APYASDVHPS
GTAPADPAGP DVAGADGPGP EGDRVAPEPP AVRVEPPAVR SARSGRDDRS THDDHDGHDG
HGGEDGRSWR PRWPWRRGAA RPADRAPVGR
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