Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5948 |
Symbol | |
ID | 5674269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7251771 |
End bp | 7252763 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641244796 |
Product | ABC transporter related |
Protein accession | YP_001510198 |
Protein GI | 158317690 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.119388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCCCAG CCGACGCGGT AGCCCCGGCC GGTGCGGCGG CTCCGGGGCA GGCGGGGGGA CCCGGCCGGT CCGGGGAGGC CCGGCTGCGC GCCGAGAACC TCACGCTGGC CTATGAGCAG CGCGTCGTCG CCACCGGTCT CGGGCTGCAG ATCCCGGACA ACTCCTTTAC CGTGATCGTC GGGCCGAACG CCTGCGGCAA GTCGACGCTG CTGCGCGCGC TGGCCCGCAT GCTGCGCCCA CGCACCGGCG CCGTGTACCT CGACGGGGCA CTGATCCGGT CACTGCCGTC CAAGGAGGTG GCCCGCCGGC TCGGGCTGCT CCCGCAGACG TCGATCGCGC CGAGCGGCAT CTTCGTCTCC GACCTGGTCG CGCGGGGGCG GTACCCACAC CAGCGGCTGC TTCGCCAGTG GTCCCGCGAC GACGAGGCGG CGGTGCGCGA GGCACTGGCC GCAACCGGGA CCGACGACCT CGCCGACCGG TACGTCGACG AGCTCTCCGG TGGGCAGCGC CAGCGGGTCT GGCTCGCGAT GGCGCTGGCC CAGCAGACAC CGATCATGCT TCTGGACGAG CCAACGACGT TCCTCGACGT GGCCCACCAG ATCGAGATCC TCGATCTCTG CGCCGACCTG CACGAGGATT CCGCCCGCAC GCTGGTGGCC GTCCTGCACG ACCTCAACCA CGCCTGCCGG TACGCGACCC ACCTGGTGGC GATGAAGGGC GGGCGGATCG TCGAGCAGGG AGTCCCGAAC GAGATCGTCA CCGCCGAGCT CGTCGAGGAG GTCTTCGGGC TGCCGTGCAG CGTGGTTCCC GACCCCGAGA CCGGAACTCC GCTCGTCGTG CCCGCCTCCC GCGCCCGGCG CCGGCAGCTC GCCGGGCGCG CGAACGAGCA CGACGGGACG GCCGCCTATG CCGCTTCGGA GGCAGAGACG ACGGACGCGA CGAAGGCGAC CGAAGCCGCG GATGCCGCGG CGATGACTGT CGGCGCCGGC TGA
|
Protein sequence | MTPADAVAPA GAAAPGQAGG PGRSGEARLR AENLTLAYEQ RVVATGLGLQ IPDNSFTVIV GPNACGKSTL LRALARMLRP RTGAVYLDGA LIRSLPSKEV ARRLGLLPQT SIAPSGIFVS DLVARGRYPH QRLLRQWSRD DEAAVREALA ATGTDDLADR YVDELSGGQR QRVWLAMALA QQTPIMLLDE PTTFLDVAHQ IEILDLCADL HEDSARTLVA VLHDLNHACR YATHLVAMKG GRIVEQGVPN EIVTAELVEE VFGLPCSVVP DPETGTPLVV PASRARRRQL AGRANEHDGT AAYAASEAET TDATKATEAA DAAAMTVGAG
|
| |