Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5894 |
Symbol | |
ID | 5674216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7157747 |
End bp | 7158895 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 641244743 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001510145 |
Protein GI | 158317637 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.262799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.416223 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGAAAC TGCGCGTCGT CCTCGACGGA ACCCCGCTGC TCGGGCCGCG CACCGGCGTC GGCCGATACA CGGCGGCGCT GCTGGCCGGC CTCGTCGAGC TGCCCGGGGC GGATCTCGAC GTGGCGGCCA CCGCCTTCAC CTGGCGCGGC GGGGCGGGGC TCGACGCCGC CCTGCCCGCC GGGGTCCGCC CGGCGGCGCG GCGCGTCCCG GCGCGGCTGC TACAGGACGC CTGGACACGC TCGGAGCGCC CGCCCACCGA GTGGCTCACC GGGCGGGCGG ACATCGTGCA CGGGACGAAC TTCGTCCTCG GCCCGCTGTC ATCGGCGCGC GGTGTGCTGA CCGTGCACGA CCTGTCGTAC CTGCGTACCC CGGACACGGT GTCGGCTGCC TCCGCGCGCT ACGCGACGCT GGTGCCGCGC GGGCTGCGCC GCGCCGCCGC GGTGCTCACC CCCAGCCGCG CCGTCGCCGA CGAGGTGATC GCCGCCTACC GGCTCGACCC GGACATGGTC ACCCCGACCC CGCTCGGCGT CGACGCCGCC TGGTTCGACG CCGCTCCCCC GGCCCGCGGC TGGCTCGCCG CGCGCGGGCT GCCCGAGCGG TACCTGCTGT TCGTCGGGTC GGCGGAGCCG CGCAAGAACC TGCCGGTGCT GCTGGAGGCG CTGCGCCGGC TGCGCGCCGA CGCGCCCGAC ACCCCGCCGC TGGCGCTCGT CGGCCCGCCC GGCTGGGGCC CGGCGCTCGA CACCTCGGGC CTGCCCGCGG ACGCCGTCGT CACCGTCGGC TACCTCGACG ACGCCGAGCT GCGCTCCGTG GTCGCCGGCG CGGCCGCGCT GTGCTTCCCG TCCCGCTACG AGGGCTTCGG GCTACCGCCG CTGGAGGCGC TGGCCGCCGG TACCCGGGTC GTGGCCGCCG ACATCCCCGC GGTGCGCGAG GTGGTCGGCG CCGCCGCCGG TGTCCGCCTG GTCACCCCCG GCCGGTGGGA CGTCTTCGCC GACGACCTCG CCGGAGCCCT CGGCGCCGCG CTCGCCGAAC CGACCGGCAC CGCCCAGTCC GCCACCCAGG CCGCCGCCGG CCGCGAGCAC GCCCGCGCGT TCACCTGGCG GCGCACCGCC GAGCTGACCG CCGCCGTCTA CCGCCGCGTC GCCGGCTGA
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Protein sequence | MPKLRVVLDG TPLLGPRTGV GRYTAALLAG LVELPGADLD VAATAFTWRG GAGLDAALPA GVRPAARRVP ARLLQDAWTR SERPPTEWLT GRADIVHGTN FVLGPLSSAR GVLTVHDLSY LRTPDTVSAA SARYATLVPR GLRRAAAVLT PSRAVADEVI AAYRLDPDMV TPTPLGVDAA WFDAAPPARG WLAARGLPER YLLFVGSAEP RKNLPVLLEA LRRLRADAPD TPPLALVGPP GWGPALDTSG LPADAVVTVG YLDDAELRSV VAGAAALCFP SRYEGFGLPP LEALAAGTRV VAADIPAVRE VVGAAAGVRL VTPGRWDVFA DDLAGALGAA LAEPTGTAQS ATQAAAGREH ARAFTWRRTA ELTAAVYRRV AG
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