Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5855 |
Symbol | |
ID | 5674178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7104955 |
End bp | 7105533 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641244705 |
Product | chitin-binding domain-containing protein |
Protein accession | YP_001510107 |
Protein GI | 158317599 |
COG category | [S] Function unknown |
COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.78659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.147977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG TAGAGCGCGG TACGCGCCAT GGCCTGATTA CCGACCCGCC CTGCCGTTCC CAAATCCTGG AGGCGTGGCA GGCAGCCGGA CTGGAATCCG GGAAGTTCTT TCCTGCCACG CAGGCCGGAC TCCGGGACCC GTACGCCCCG GACGACGTGA CGAGCAGCCA ACCGCCCGCG GACGGCAAAA TCGCCAGCGC GGGCCATGAT TTCGCCGCCA TACTGGACGA CCCGGGCCGC AACTGGGCGA AGCACCCGGT GAAGGCGGGC CAGGAACTAA CCGTCACCTG GCATTACCAC ACCGCGCACA AGACCCGACG ATGGAACTAT TTCATCACCC GGGACGGGTG GGATCCGAAT GCCCCGCTAA CCCGCGACCA GTTCGAATCA GAACCCTTCC ACCAGGTCCA GAACCCGGGA CAGCCCTACT GGTCAAGCGA TGATCTGATC CCGCTGGATC CGACCATGCA CACGTTGCCG CTGCCCAACC GCCGCGGCTA TCACGCGGTG CTGGCCGTGT GGGAGGTAGC CGACACCGGA AATGCCTTCT ATCAGGTCAT GGACCTTAGT TTCTCCTGA
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Protein sequence | MTEVERGTRH GLITDPPCRS QILEAWQAAG LESGKFFPAT QAGLRDPYAP DDVTSSQPPA DGKIASAGHD FAAILDDPGR NWAKHPVKAG QELTVTWHYH TAHKTRRWNY FITRDGWDPN APLTRDQFES EPFHQVQNPG QPYWSSDDLI PLDPTMHTLP LPNRRGYHAV LAVWEVADTG NAFYQVMDLS FS
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