Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5838 |
Symbol | |
ID | 5674161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7081047 |
End bp | 7084103 |
Gene Length | 3057 bp |
Protein Length | 1018 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641244688 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_001510090 |
Protein GI | 158317582 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.198512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.737923 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTGGCG ATCGAGGGGC TAGCATCTTG GTTGTCGGTG AGCCTCGCCG ACATGCCTGC CGGAGGAGTT TCGCCGTGGT TCTAGACAAG ATCTTGCGTG CCGGTGAGGG CCGGATTCTG CGCAAGCTCA AGGCGATCGC CGAGCAGGTG AACCTCATCG AGGACGACTT CACCGGTCTG ACCGACGCCG AGCTGCGCGG GATGACCGAC GAGTTCCGCC AGCGCCTGGC CAGCGAAGAG GAAACCCTCG ACTCGTTGCT GCCCGAGGCG TTCGCGACGG TGCGCGAGGC GGCGCGGCGC ACGCTCGGCC AGCGCCATTT CGACGTCCAG ATCATGGGTG GCGCGGCGCT GCACCTGGGC AACATCGCCG AGATGAAGAC CGGTGAGGGC AAGACCCTGG TCTCCACGCT GCCGTCCTAC CTGAACGCCC TGAGCGGCAA CGGCGTCCAC ATCGTCACGG TGAACGACTA CCTGGCCCAG CGCGACGCCG AGAACATGGG CCGTGTCCAC CGCTTCCTCG GCCTCACGGT CGGTGTCATC CATCCCCAGA TGCCGCCGTC GGTGCGCCGC CAGCAGTACC GGTGCGACAT CACCTACGGC ACGAACAACG AGTTCGGGTT CGACTATCTG CGCGACAACA TGTCCTGGAG CGCCGAGGAA CTGGTCCAGC GCGGCCATCA CTTCGCCGTC GTGGACGAGG TCGACTCCAT CCTCATCGAC GAGGCCCGCA CGCCCCTGAT CATCAGCGGC CCGGCCGACA ACCCGACCCG CTGGTACACC GAGTTCTCGC GGATCGCCCC CCTGCTCGAG CGGGACGTCG ACTACGAGGT CGAGGAGGGC AAGCGGACGG TCTCGATCAG CGAGGTCGGC GTAGAGAAGG TCGAGGACCA GCTCGGCATC GAGAACCTGT ACGAGTCGGT GAACACCCCC CTCGTCGGTT ACCTCAACAA CGCGCTGAAG GCCAAGGAGC TCTACAAGCG GGACAAGGAC TATATCGTCA CCGACGGTGA GGTCCTCATT GTCGACGAGT TCACCGGTCG CGTCCTGCAC GGCCGCCGTT ACAGCGAGGG AATGCACCAG GCGATCGAGG CCAAGGAGAA GGTCGAGATC AAGCAGGAGA ACCAGACCCT GGCGACGATC ACTCTCCAGA ACTACTTCCG GCTCTACGAC AAGCTGTCCG GAATGACCGG TACGGCCATG ACGGAGGCCG CCGAGTTCCA CCAGATCTAC GCCCTCGGCG TGGTGCCGAT CCCGACCAAC AAGCCGATGG CTCGCACGGA CCAGGCCGAC GTCGTCTACA AGACCGAGAT CGCGAAGTTC GACGCGGTCG TGGAGGACAT CGCCGAGCGG CACGAGAACG GTCAGCCCGT CCTGGTCGGC ACGACCAGCG TGGAGAAGTC GGAGTACCTG TCCAAGCAGC TCGCCAAGCG CGGTGTCCGG CACGAGGTGC TGAACGCCAA ACACCACGAG CGCGAGGCGA TGATCATCGG CGAGGCGGGC CGGCGCGGCG CGGTCACCGT GGCGACGAAC ATGGCCGGCC GAGGCACCGA CATCATGCTC GGCGGCAACC CCGAGTTCAT CGCCCAGACG GAGCTTCGCC AGCGCGGCCT GTCTCCGATC GACACCCCGG ACGACTACGA GGCGGCCTGG CCCGAGGCGC TGGAGAAGGC CCGTGCGTCG GTCAAGGCCG AGCACGAGGA AGTCGTCAAC GCCGGTGGCC TCTATGTGCT CGGCACCGAG CGGCACGAGT CCCGCCGGAT CGACAACCAG CTGCGCGGCC GTGCCGGCCG TCAGGGCGAC CGCGGCGAGT CCCGGTTCTA CCTCTCCCTC GGTGACGACC TCATGCGGTT GTTCAACGCC GCGGCGGTCG AGGGCATCAT GGACCGCCTC AACATCCCGG ACGACGTCCC GATCGAGTCC AAGATCGTGA CTCGCGCGAT CCGTTCCGCG CAGACCCAGG TCGAGGGCCA GAACTTCGAG ATCCGCAAGA ACGTCCTCAA GTACGACGAA GTCATGAACA AGCAGCGCAC CGTGATCTAC GAGGAGCGCC GCAAGGTCCT GGAGGGCGCC GACCTGCACG AGCAGGTTCG CCACTTCGTT GATGACACCG TCGAGGGCTA TGTGCGCGGC GCGACGGCCG ACGGGTACCC GGAGGAGTGG GACCTCGAAA CCCTCTGGTC GGGCCTGGGC CTGCTCTACC CGGTCGGCGT CGACGCACCG GGCACCGACG ACCGCGAGGG GCTGACCTCC GACCTCCTGC TCGAGGATCT TCAGGCGGAC GCGCAGGACG CCTACGACCG GCGCGAGGCC GACCTCGGCG ACAAGCCGGA CGGCGAGGCC GTCATGCGTG AGCTGGAGCG CCGGGTGGTG CTCGCGGTAC TCGACCGCAA GTGGCGTGAG CACCTCTACG AGATGGACTA CCTGCAGGAG GGCATCGGCC TGCGGGCGAT GGGGCAGCGA GACCCGGTCG TGGAGTACCA GCGCGAGGGC TTCGACATGT TCCAGACGAT GATGGAGGGC ATCAAGGAGG AGTCGGTCCG CCTCCTGTTC AACGTCGAGG TGCAGGTAGC GGGGCGGGAC ACCGACCAGA GCGGCACCGC GCCCGAAGGA GCGCCCGCAG CCCCGGCCGG CACGACGCCC ACGCCGGCCA CCCCGGCCGA GCGCGGCTCC GTGTCCGTCG GCGCGGTGCC TCTGGTCACC CCGGCCGCGC CCGCACCGGC GCAGCCCGCG CGGACCGCTC CCGAGCCTCC GCCGGCCCCG GTGCCGGCGT CCCCGCCGCC CGTCTTCGTC AAGGGCCTCG AACCGCACCG CCCGACCGGT GGACTGCGTT ACACGGCGCC GTCTGTCGAC GGCGGCTCGT CCACGGTGAC GACCGTCGAC AACGGGTCCG AGCTGTCCCG TGCCGGCGGT GGTGGGCCGC GCTCGGCCGG CGGCGGCGTG TCCCGCGGCG CTGGCGAGGG CGGAACGGCC CGCCCGGCAC GCAACGCGCC CTGCCCCTGC GGCTCGGGGC GGAAGTACAA GCGCTGCCAC GGCGATCCGG CCCGCCGCAA CGACTGA
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Protein sequence | MGGDRGASIL VVGEPRRHAC RRSFAVVLDK ILRAGEGRIL RKLKAIAEQV NLIEDDFTGL TDAELRGMTD EFRQRLASEE ETLDSLLPEA FATVREAARR TLGQRHFDVQ IMGGAALHLG NIAEMKTGEG KTLVSTLPSY LNALSGNGVH IVTVNDYLAQ RDAENMGRVH RFLGLTVGVI HPQMPPSVRR QQYRCDITYG TNNEFGFDYL RDNMSWSAEE LVQRGHHFAV VDEVDSILID EARTPLIISG PADNPTRWYT EFSRIAPLLE RDVDYEVEEG KRTVSISEVG VEKVEDQLGI ENLYESVNTP LVGYLNNALK AKELYKRDKD YIVTDGEVLI VDEFTGRVLH GRRYSEGMHQ AIEAKEKVEI KQENQTLATI TLQNYFRLYD KLSGMTGTAM TEAAEFHQIY ALGVVPIPTN KPMARTDQAD VVYKTEIAKF DAVVEDIAER HENGQPVLVG TTSVEKSEYL SKQLAKRGVR HEVLNAKHHE REAMIIGEAG RRGAVTVATN MAGRGTDIML GGNPEFIAQT ELRQRGLSPI DTPDDYEAAW PEALEKARAS VKAEHEEVVN AGGLYVLGTE RHESRRIDNQ LRGRAGRQGD RGESRFYLSL GDDLMRLFNA AAVEGIMDRL NIPDDVPIES KIVTRAIRSA QTQVEGQNFE IRKNVLKYDE VMNKQRTVIY EERRKVLEGA DLHEQVRHFV DDTVEGYVRG ATADGYPEEW DLETLWSGLG LLYPVGVDAP GTDDREGLTS DLLLEDLQAD AQDAYDRREA DLGDKPDGEA VMRELERRVV LAVLDRKWRE HLYEMDYLQE GIGLRAMGQR DPVVEYQREG FDMFQTMMEG IKEESVRLLF NVEVQVAGRD TDQSGTAPEG APAAPAGTTP TPATPAERGS VSVGAVPLVT PAAPAPAQPA RTAPEPPPAP VPASPPPVFV KGLEPHRPTG GLRYTAPSVD GGSSTVTTVD NGSELSRAGG GGPRSAGGGV SRGAGEGGTA RPARNAPCPC GSGRKYKRCH GDPARRND
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