Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5799 |
Symbol | |
ID | 5674122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7042935 |
End bp | 7044077 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641244649 |
Product | hypothetical protein |
Protein accession | YP_001510051 |
Protein GI | 158317543 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.808848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCGATTG GCGTCGATCG ACGTGCGGTC CTGCTCACGA CCGGCGTACT GGCCGTGGTC CCGATGAGCC CCGAGAGCCC GACACCGGCC GCCGGTCACG AGACCGCCTC GAGCCTGCAT GACGCGTGCC TCGGGGCACT GCGCGCGGCC GTCGCGAACT ACGAGACCGT CGATCTCGCC ACCACCGCGT CCACCCTCGA GCCGCTCGAG GAGACCAGTC GGACCATCCC GCAGCAGTAC CGGCTGCGGG GGCGCGCCGC CATCGACTGG ATGTGGCTGC ACGCGGCGGT CACCACCGCC GCCGCCGCCG CCTCGTACGA CCGGGGCCGG CACGGCGAAG CCGCGGCCCG CGCCGACCGC GCCGCGTCCC TGGCCCGCGC GGCCGGAGAC GGCCCGCTCG CCGCCCGCGC ACTGGCACTG CGCGCCCGGG TGGTGCGCCC GCACAGCCCG GCCGTCGCCC TGCAGATCGC CGGCTCGGCC GCGCGGATCG CCGGCCGCAG CCCCACCCGG GCCCTGATCT CGGGCAAGGT CGCCGCCAGC GCCTGTGCCG CCGCCGGTGA CGCCGCGGGC GTGCGCGACG CCGTGGCCCG GGCCTGGGCC ACCATGGCGG AGCTCGGTGA GGACGTGCAC GGGCGTCCCG GGTTCAGCCT CGACACCTAT TCACCCGCCG ACCTGGCCCT CGCCTGCGCA GAAGCACTCA CCACCGTCGG CGCAGCCGAC GAGGCGGCTC CCTACCTCGA CCGGGCCGCG TCGCTCATCG CCCGCAGCGG CCAGACCGGT ATGATCGTCT CGGTGCGGAT GGCTCAGTCG CGGGCCGCGA TCGCCCGTGA CTTCCCGGAC CGGGACGAGG CGGTCGAGCA CGCCTCCGAC GCGGTCGCCC TGGCCGCCCG CCGGCCGGCC GAGTGGGTCG CCCGCCTGGT GCGCGACGTC TCCGACCTGG CCGAGATCCG GACAGGTCAC GGCTTCGACG ATCTCGTGGC GGCCACCGCC GGGTGGATCG CGCTTCCGGC AGCGGCTCCG AGCCCCGGCG ACGGTGCCGA CCGCGAGGTG GCCGACCGCG ACGTGACCCT CACCCACGCC GGCGGACCGA CGGCCGTCCC GTCGCCGCGC GCCGAGATGA TGTCGGGCCG CAAGGACATG TGA
|
Protein sequence | MSIGVDRRAV LLTTGVLAVV PMSPESPTPA AGHETASSLH DACLGALRAA VANYETVDLA TTASTLEPLE ETSRTIPQQY RLRGRAAIDW MWLHAAVTTA AAAASYDRGR HGEAAARADR AASLARAAGD GPLAARALAL RARVVRPHSP AVALQIAGSA ARIAGRSPTR ALISGKVAAS ACAAAGDAAG VRDAVARAWA TMAELGEDVH GRPGFSLDTY SPADLALACA EALTTVGAAD EAAPYLDRAA SLIARSGQTG MIVSVRMAQS RAAIARDFPD RDEAVEHASD AVALAARRPA EWVARLVRDV SDLAEIRTGH GFDDLVAATA GWIALPAAAP SPGDGADREV ADRDVTLTHA GGPTAVPSPR AEMMSGRKDM
|
| |