Gene Franean1_5726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5726 
Symbol 
ID5674052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6954941 
End bp6956185 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content66% 
IMG OID641244579 
Productradical SAM domain-containing protein 
Protein accessionYP_001509982 
Protein GI158317474 
COG category[R] General function prediction only 
COG ID[COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.559875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGCC CCCTCGGCAC CGCCTATGGA GATCCGTCGG ACGAATGGCC CGCCAACGAG 
CTCGACTTCC ACCGGCTGAC CGCCGCGGGA TGGCGGCCCA CGCCCTTCCG CCAGATCGTC
CTCAAGATCA ATAGCAGATG CAATCTGTCC TGCACCTACT GTTATGTCTA CCACCAGGCC
GACCAGAACT GGCGGCAGCA GCCCGTCACG ATGAGCCCGG CGGTGGTGGA GGCCACGGCA
CGCAGGCTCG CCGCACACGC AAAGACGCAC GAACTCCCAT GGATGCAGAT CATCCTGCAC
GGCGGTGAGC CGCTCCTGGC CGGCCACGAC CACCTCCGGA ACGTCGCGGA GCGTCTGCTC
GCCGCGGTCG GCACTGACAC CGCCGTGGAG TTCGTCCTCC AGACCAACGG CACTCTGATC
GACGAGGTGT TCCTCGAGCT CTGCCAGGAG TTCCGCATCC AGGTCGGGGT CAGCGTCGAC
GGCGATCTGG CGGTCAACGA CCGGCGCCGG ACCCGTCGCA ACGGGAGTGG GAGCCACGCC
GAGATCGCCC GAGGCCTGCA CCTGCTCACC TCGGAACGTT TCCGGTCGAT CTTCTCCGGG
CTGCTCTGTG TCATCGACCC CACGAGCGAT CCGGGAGAGG TGTACGAGAG CCTGCTGGCA
TGGCGGCCAC CGAGCGTCGA CTTCCTCCTT CCGCACGGGA ACTGGACGGC CCGCCCACCG
GCCCGGGACA GCGACGAGAC GTCAACGCCC TACGCCGACT GGCTCGGCAT GGTGTTCGAC
CGTTGGTATC CGGCCCCCAG CCACGAGACG GACATCCGCC TGTTTCTGGA GATCATCTCG
CTGATCCTCG GCGGCCACAG CCGCATCGAG ACGGTCGGTC TCTCGCCCTC GTCCGTCGTC
GTCGTCGAGA CCGACGGCTC GATCGAACAG GTCGACGCGC TCAAGTCCGC CTATCACGGC
GCGGCATCCA CCGGCCTCAC CGTTACGCGC AATGACCTCG ACGAGGCGCT GCGCCATCCA
GGTATCCTTG CCCGGCAGAT CGGCGCCGCC GCGCTCGGCC GCGAGTGCAC GCGATGCCCG
GTGCACCGCG TGTGCGGAGG TGGATATTAT CCCCACCGGT ATCAGGCCGG CAGCGGCTTT
CGGAACAGAT CCGTCTACTG CCCGGATCTG TTCGCACTGA TCACACGAAT CGGCAAACAG
ATCCGGGCAG ATATCGAAAA GGCAAAGCCG CAGGGTGAAC ATTGA
 
Protein sequence
MIGPLGTAYG DPSDEWPANE LDFHRLTAAG WRPTPFRQIV LKINSRCNLS CTYCYVYHQA 
DQNWRQQPVT MSPAVVEATA RRLAAHAKTH ELPWMQIILH GGEPLLAGHD HLRNVAERLL
AAVGTDTAVE FVLQTNGTLI DEVFLELCQE FRIQVGVSVD GDLAVNDRRR TRRNGSGSHA
EIARGLHLLT SERFRSIFSG LLCVIDPTSD PGEVYESLLA WRPPSVDFLL PHGNWTARPP
ARDSDETSTP YADWLGMVFD RWYPAPSHET DIRLFLEIIS LILGGHSRIE TVGLSPSSVV
VVETDGSIEQ VDALKSAYHG AASTGLTVTR NDLDEALRHP GILARQIGAA ALGRECTRCP
VHRVCGGGYY PHRYQAGSGF RNRSVYCPDL FALITRIGKQ IRADIEKAKP QGEH