| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5686 |
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| Symbol | |
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| ID | 5674012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6903559 |
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| End bp | 6904842 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641244539 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001509942 |
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| Protein GI | 158317434 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.146283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGTGG CCGACATGAA GGGGGCCGAC GTGACAGTGG CCGACTTCGC CGCGAGCGTC
TCGGCGGCGA GCTGGGACGA CCTCGACCCG CGCGAGTTCG ACCGGTTGCG CCGGCTGGTC
GGTGCCGCCG GGGGCCGCGG CGACAGCACG CTCGCCGCGA TGTCGGACAA GCAGATCGCG
CGGTCACTGG GCGTCGCGCT GGTGGAGGAC GGCCGCACCC ACCTGTGCGC GGGGGCGGTG
CTGCTGTTCG GGCGGCCCGA GGCCCTGCGG GCGCACGTGC CGAACCACGA GGCCGCCATC
CAGGTCATCG GGCCGGAGAC CGGCGAGCCC ACGGACGGGA TGAACGACTT CTTCCGCTGG
CCGCTGCTGC GTCTCACCGA GGAGCTGCTG GCCCGTTTCC GGGCCCGCAA TCCCGAGCGC
GAGATCCGTT ACGAGCTGGT GCGCACCGGC GTGCCCGCCT ACGCCGAGCA GGCGTTCCGC
GAGCTGCTCG CCAACGCCTT CGTCCACCGC GACTACACCG CGGCCGGTGC CGTCCACGTG
CAGTGGACCG GTGAGGGCGT CGAGATCTCC AGCCCCGGTG GCTACGCCGA CGCGGTGCGC
GACCCCACCG CTCGGCTGCT CGCGCGGCCC CCGCGGCCGC GCAGCCCGCT GCTGGCGGAC
GCGTTCCGCC GGGCGGGGAT CACCGACCGC TCCGGACGGG GGATCCGCCG GGCGCACGCC
GCCCAGCTCC GCAACGGCCT GGCCGCGCCG GACCACACCG GCTCGACCGC CGACACCGTG
GTCGCCGTGT TGCCCAGGCA ACCCGCGGAT CTCGCGTTCG CGCTGTTCGC CGTCGGCCGG
GAGTACGGCG GACGTCCGCT GGCGCTGCCG GACCTGCTGG TTCTCACCGC CGGGCTGGGC
GGGCGCACGC TGCGGACGGC CGACGTCGCC GAGCTGCTCG GCACCGACAA GGACCGGGCA
CGCCGGCACC TGACGGACAT GGTTCACAAC GGCCTGATGG ACGTCGCCAG CGGAGGCGGC
GTGCGGATCT GGGTGCCGTC CGTCCAGGTA CGCCGCGCGC TGCGGGATGA CGCGAGCCAG
CTGCACGCGC GTTCGCCGCG CCCCGCGCGG CGCGGCGAAC GCGCCGGGTC CACGACGGCC
AGCGCAGGCG CGCCGCGCGG CTCCGCGACG GCCAGCGCAG GCGCGCCGCG ATGGCCGGCA
GCCGCGGCGC ACCCCGCGCC GCGGGGCTGG GCCATCCCGG AGGGCGGCCC GGCGCTGCCG
GCGCGGCGCG TCTCGGACGG CTGA
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| Protein sequence | MTVADMKGAD VTVADFAASV SAASWDDLDP REFDRLRRLV GAAGGRGDST LAAMSDKQIA
RSLGVALVED GRTHLCAGAV LLFGRPEALR AHVPNHEAAI QVIGPETGEP TDGMNDFFRW
PLLRLTEELL ARFRARNPER EIRYELVRTG VPAYAEQAFR ELLANAFVHR DYTAAGAVHV
QWTGEGVEIS SPGGYADAVR DPTARLLARP PRPRSPLLAD AFRRAGITDR SGRGIRRAHA
AQLRNGLAAP DHTGSTADTV VAVLPRQPAD LAFALFAVGR EYGGRPLALP DLLVLTAGLG
GRTLRTADVA ELLGTDKDRA RRHLTDMVHN GLMDVASGGG VRIWVPSVQV RRALRDDASQ
LHARSPRPAR RGERAGSTTA SAGAPRGSAT ASAGAPRWPA AAAHPAPRGW AIPEGGPALP
ARRVSDG
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