Gene Franean1_5610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5610 
Symbol 
ID5673937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6807012 
End bp6808853 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content75% 
IMG OID641244463 
Productmethyltransferase type 12 
Protein accessionYP_001509867 
Protein GI158317359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.194335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000698076 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTGCTGC TGGTACCCAT CCTGGTGAGC GTCGGGCTCA TCCTGAACGG AATCCGCCTG 
CGCGGCCGGC TGCGCCGGCT GGACACCGTC GCCGCGTCGG GCCGGCCGGT CGACCCCGCC
CACGTCTTCC TCGTGGCCGA GGGGGTGCGG CTCTCCGACG CGGCCCGGCG CGCTGCGAGC
AACCACGCCC GCCGCGAGCG GCTGCTGGTG CTCGACCTCG TCCCCGCCGA CCTCACCGTG
GAACGCGCGC TCGACGTGGC CCGGATGGTC GACACCCGGA CCTACCGGGC CGACCGTTCG
GCGCCCGGCC GGGGCGCGTT CCAGGCCCTG CTGGTGCACG CCGACCTGCT GGAACGGGTC
GGAATCACCC AACGGGAGGG GTTCAGCCCG GTCGAACTGG TCGACATCAC GACCCGCCTG
AAGCGGCACG CCCCGACCGC CACCGACCTG GCCGTCGTTC CCGGGTTGCA GGCCGCGCGT
GACGACGCCG CGATGCGGGT GCGCGTCCAG CAGCGGGCCT ACGCGTGCAC CCCGGCGAGC
CTGTACATGC CGTACGCGCC GCACATCGGA ACCTTCATCG GCGCCCAGGT CAGCCAGCCG
GTCGCGCTCG TCGCGACGGC GCTGTTCTGG TTCCAGCCGT TCTTCGTCTG CGCGGGACGG
GTCCCGCTCG CCCCCCGCGA CCTGATCCGC AGCCCGATCG TCCGCATCCT CGGCCTTGTG
ATCTTCGTTG TGCACTCCGC GCGGGCCGGG CGCCGGGCGA AGGCCGCCGG GCTGCCCGCG
GACCCAGCGA AGGCGGAGGC GCGCCGCCGC CGGCAGGAGA CAGCCGCCTG GTACGCCGCC
CGCGCCCGCC ATGTCGCGCG GCTGCGCGAG GCCACCAGCG CCGAGTGCCC CTGGTGCGGG
TCGGTCGAGC TCAGCGTCCG GGTGCGCTCG CGGGACCTGG AGATGGGCAA GCCGGGGCGC
TTCCGCCTCA ACGGCTGCGA GGCCTGCGGC CACGTCTTCC TCAACCCGAT GATCACCCCG
GACGGGCAGG ACTACTACGA GCGCGACTGG CGGGACGGCT TCGCCGCCGA GACCGCGGAA
CACGCCCGTG CCCGCGAGGC CGCGGCCGAC CAGGCCCGGG CCGAGCTGCT GCGTCCCTAC
ACCACCCCGC GGGCCTGGCT GGACGTCGGA ACCGGCTACG GCCACTTCTG CAACGTCGCC
CGGGCCCACT GGCCGGCCAC CGTGTTCGGC GGTCTCGACC TCTCCGACGC GGTGGACGAC
GCCTACCTGC GTGGCTGGGT GGACGCCGCC CACCGGGGCG AGCTGAGCCA GATCGCGGAC
GACCTCGCCG GCCGCTACGA CGTGATCAGC ATGTTCGGCT ATCTCGAGCG GACCCGCTAC
CCGTCGGAGG AGCTGGACGG CGCAGTCAAG GCGCTCGCCC CCGGTGGATA CCTGATGATC
GAGCTGCCGA ACGCGGACTG CCCGGCGGCG CGGCGGCTGC GGGCGTACTG GGCCGGCTGG
GACGTGCCGC GCCGGCTGCA CTTCATTCCG GCAGACAACC TGCTCGCCGC GCTGGAGGAC
CGCGGGCTGC GCCCCATCGC CGTCCAGTTC GGGCCGGCGC TGCGCCCCGG TGACCTCACC
CGGGCGCTGG GCCTGCTCAT CCAGCGGGTG GCGCCGCGGC GCCGGCCGTG GCTGGACCCG
GCCCGGAGCG GGCCGGGCCC GCGGCTGCTG CGCGTGCCGT TGCTGCTGGC CTCGATCGGC
CCGTTCCTGC TGACCGCCCT ACTGGACCGG GCCAGCAGGT CCTGGCAGGC CAAGGGGGAG
CGTTCCAACA CCTACCGCGT GCTGGCCCGC AAGGAGAGCT GA
 
Protein sequence
MLLLVPILVS VGLILNGIRL RGRLRRLDTV AASGRPVDPA HVFLVAEGVR LSDAARRAAS 
NHARRERLLV LDLVPADLTV ERALDVARMV DTRTYRADRS APGRGAFQAL LVHADLLERV
GITQREGFSP VELVDITTRL KRHAPTATDL AVVPGLQAAR DDAAMRVRVQ QRAYACTPAS
LYMPYAPHIG TFIGAQVSQP VALVATALFW FQPFFVCAGR VPLAPRDLIR SPIVRILGLV
IFVVHSARAG RRAKAAGLPA DPAKAEARRR RQETAAWYAA RARHVARLRE ATSAECPWCG
SVELSVRVRS RDLEMGKPGR FRLNGCEACG HVFLNPMITP DGQDYYERDW RDGFAAETAE
HARAREAAAD QARAELLRPY TTPRAWLDVG TGYGHFCNVA RAHWPATVFG GLDLSDAVDD
AYLRGWVDAA HRGELSQIAD DLAGRYDVIS MFGYLERTRY PSEELDGAVK ALAPGGYLMI
ELPNADCPAA RRLRAYWAGW DVPRRLHFIP ADNLLAALED RGLRPIAVQF GPALRPGDLT
RALGLLIQRV APRRRPWLDP ARSGPGPRLL RVPLLLASIG PFLLTALLDR ASRSWQAKGE
RSNTYRVLAR KES