Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5610 |
Symbol | |
ID | 5673937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6807012 |
End bp | 6808853 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641244463 |
Product | methyltransferase type 12 |
Protein accession | YP_001509867 |
Protein GI | 158317359 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.194335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000698076 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCTGCTGC TGGTACCCAT CCTGGTGAGC GTCGGGCTCA TCCTGAACGG AATCCGCCTG CGCGGCCGGC TGCGCCGGCT GGACACCGTC GCCGCGTCGG GCCGGCCGGT CGACCCCGCC CACGTCTTCC TCGTGGCCGA GGGGGTGCGG CTCTCCGACG CGGCCCGGCG CGCTGCGAGC AACCACGCCC GCCGCGAGCG GCTGCTGGTG CTCGACCTCG TCCCCGCCGA CCTCACCGTG GAACGCGCGC TCGACGTGGC CCGGATGGTC GACACCCGGA CCTACCGGGC CGACCGTTCG GCGCCCGGCC GGGGCGCGTT CCAGGCCCTG CTGGTGCACG CCGACCTGCT GGAACGGGTC GGAATCACCC AACGGGAGGG GTTCAGCCCG GTCGAACTGG TCGACATCAC GACCCGCCTG AAGCGGCACG CCCCGACCGC CACCGACCTG GCCGTCGTTC CCGGGTTGCA GGCCGCGCGT GACGACGCCG CGATGCGGGT GCGCGTCCAG CAGCGGGCCT ACGCGTGCAC CCCGGCGAGC CTGTACATGC CGTACGCGCC GCACATCGGA ACCTTCATCG GCGCCCAGGT CAGCCAGCCG GTCGCGCTCG TCGCGACGGC GCTGTTCTGG TTCCAGCCGT TCTTCGTCTG CGCGGGACGG GTCCCGCTCG CCCCCCGCGA CCTGATCCGC AGCCCGATCG TCCGCATCCT CGGCCTTGTG ATCTTCGTTG TGCACTCCGC GCGGGCCGGG CGCCGGGCGA AGGCCGCCGG GCTGCCCGCG GACCCAGCGA AGGCGGAGGC GCGCCGCCGC CGGCAGGAGA CAGCCGCCTG GTACGCCGCC CGCGCCCGCC ATGTCGCGCG GCTGCGCGAG GCCACCAGCG CCGAGTGCCC CTGGTGCGGG TCGGTCGAGC TCAGCGTCCG GGTGCGCTCG CGGGACCTGG AGATGGGCAA GCCGGGGCGC TTCCGCCTCA ACGGCTGCGA GGCCTGCGGC CACGTCTTCC TCAACCCGAT GATCACCCCG GACGGGCAGG ACTACTACGA GCGCGACTGG CGGGACGGCT TCGCCGCCGA GACCGCGGAA CACGCCCGTG CCCGCGAGGC CGCGGCCGAC CAGGCCCGGG CCGAGCTGCT GCGTCCCTAC ACCACCCCGC GGGCCTGGCT GGACGTCGGA ACCGGCTACG GCCACTTCTG CAACGTCGCC CGGGCCCACT GGCCGGCCAC CGTGTTCGGC GGTCTCGACC TCTCCGACGC GGTGGACGAC GCCTACCTGC GTGGCTGGGT GGACGCCGCC CACCGGGGCG AGCTGAGCCA GATCGCGGAC GACCTCGCCG GCCGCTACGA CGTGATCAGC ATGTTCGGCT ATCTCGAGCG GACCCGCTAC CCGTCGGAGG AGCTGGACGG CGCAGTCAAG GCGCTCGCCC CCGGTGGATA CCTGATGATC GAGCTGCCGA ACGCGGACTG CCCGGCGGCG CGGCGGCTGC GGGCGTACTG GGCCGGCTGG GACGTGCCGC GCCGGCTGCA CTTCATTCCG GCAGACAACC TGCTCGCCGC GCTGGAGGAC CGCGGGCTGC GCCCCATCGC CGTCCAGTTC GGGCCGGCGC TGCGCCCCGG TGACCTCACC CGGGCGCTGG GCCTGCTCAT CCAGCGGGTG GCGCCGCGGC GCCGGCCGTG GCTGGACCCG GCCCGGAGCG GGCCGGGCCC GCGGCTGCTG CGCGTGCCGT TGCTGCTGGC CTCGATCGGC CCGTTCCTGC TGACCGCCCT ACTGGACCGG GCCAGCAGGT CCTGGCAGGC CAAGGGGGAG CGTTCCAACA CCTACCGCGT GCTGGCCCGC AAGGAGAGCT GA
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Protein sequence | MLLLVPILVS VGLILNGIRL RGRLRRLDTV AASGRPVDPA HVFLVAEGVR LSDAARRAAS NHARRERLLV LDLVPADLTV ERALDVARMV DTRTYRADRS APGRGAFQAL LVHADLLERV GITQREGFSP VELVDITTRL KRHAPTATDL AVVPGLQAAR DDAAMRVRVQ QRAYACTPAS LYMPYAPHIG TFIGAQVSQP VALVATALFW FQPFFVCAGR VPLAPRDLIR SPIVRILGLV IFVVHSARAG RRAKAAGLPA DPAKAEARRR RQETAAWYAA RARHVARLRE ATSAECPWCG SVELSVRVRS RDLEMGKPGR FRLNGCEACG HVFLNPMITP DGQDYYERDW RDGFAAETAE HARAREAAAD QARAELLRPY TTPRAWLDVG TGYGHFCNVA RAHWPATVFG GLDLSDAVDD AYLRGWVDAA HRGELSQIAD DLAGRYDVIS MFGYLERTRY PSEELDGAVK ALAPGGYLMI ELPNADCPAA RRLRAYWAGW DVPRRLHFIP ADNLLAALED RGLRPIAVQF GPALRPGDLT RALGLLIQRV APRRRPWLDP ARSGPGPRLL RVPLLLASIG PFLLTALLDR ASRSWQAKGE RSNTYRVLAR KES
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