| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5607 |
|---|
| Symbol | |
|---|
| ID | 5673935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 6802712 |
|---|
| End bp | 6803653 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641244461 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001509865 |
|---|
| Protein GI | 158317357 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3786] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.133925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000118142 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACAC ACCGTAGGTC CGGGCGGTCC GAGGGCCGCC GACTCAGGGG CGCACGCGGC
GACCGCGCCA CCGCGCAGAC CGTCGCGATC GGGATGGCCG CGGTCGGCGC GACACTGGTG
GTCGGCGCCG CCGGAGCACT GCACGTGACC GGCTCGGTGG AGGATCCGGA CATGTCGACG
ACGGCGCAGG CAGGCGACGG GGCCGTTCCC ACCACTTCGG CGCGGCCCGA CGTGGCCACG
CCGCACCGCA TCACCGACTC CACCGGCAAC CCCGATCCCG CGGCGGCCGA CGGTCGCGCG
GCCGCGGCCC CGGCCCCGGG CGCGGAGCAG TCCCGCGGCG CGATCCCCGG CATCGGCGAC
CTCATGATGT CGCGGATCCC GTCGTCGACC CGGCAGGTCA TCGTCGTGAC CGGCGCAGAC
CAGTCCTCAA CCGTGAACCG CGTCGTGCTC TGGCAGCGCG CGGACGCCGA CGCCCCCTGG
ACAGCCGTCG GCGCGGAGAT CCCCGGCCGC AACGGAGCCA ACGGCTGGAC CCACGACCAC
GTCGAGGGCG ATCTGCGTAG CCCCGTGGGC GCGTTCAGCC TCACCGCCGC CGGGGGCCGC
TACGCCGACC CGGGCACCGC GCTTCCCTAC GAGTACCGCC CGTCCTTCTA TCAGGCCGGC
GGCTACGAGG GCGACCCGAT GGGGGAGGCC TTCAACTACG TGGTCGCGAT CGACTACAAC
CGGTTGCCGG GGCATCCGCC GTCCGACCCG ACCCGGCCGC TGGGCGCCGC GGCCGGCGGC
GACATCTGGC TGCACGTGGA CCACAACACA CCCACCCGCG GCTGCGTCAG CCTCCCGCAG
GCCTCGATGG AGACCGTCCT GCACTGGCTG GCCCCGAGCA GCCATCCCAT GATCATCATG
GGTGACCGGG CAAGCCTGGA GGCGTCCGCC GGCCAGCAGT GA
|
|---|
| Protein sequence | MATHRRSGRS EGRRLRGARG DRATAQTVAI GMAAVGATLV VGAAGALHVT GSVEDPDMST
TAQAGDGAVP TTSARPDVAT PHRITDSTGN PDPAAADGRA AAAPAPGAEQ SRGAIPGIGD
LMMSRIPSST RQVIVVTGAD QSSTVNRVVL WQRADADAPW TAVGAEIPGR NGANGWTHDH
VEGDLRSPVG AFSLTAAGGR YADPGTALPY EYRPSFYQAG GYEGDPMGEA FNYVVAIDYN
RLPGHPPSDP TRPLGAAAGG DIWLHVDHNT PTRGCVSLPQ ASMETVLHWL APSSHPMIIM
GDRASLEASA GQQ
|
|---|
| |