Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5600 |
Symbol | |
ID | 5673928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6792603 |
End bp | 6793442 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641244454 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001509858 |
Protein GI | 158317350 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0144285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.006631 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACCGGGC CGACATCACC CCACACCCTG CCGGCGCCCG GCCGCGGCTC CGCGCGGGCC GGCGCCTTAC CCCTCGACCG CTCCGGGCCC GCTCCGGGAA TCGCTCCCGG TGCGGGCCGG CGCGGCGAGA GCGCCGACGC GGCCGTCCTG GATGCCGCCG CCGCGTCGCT GCTCAGCGTC GGCGTGCGTC GGACGACCGC CACCGACGTG GCCCGGCGCG CCGGCGTCAG CCGGATGACG CTGTACCGGC GCTGGCCCGA CCTGCGCTCC CTTGTCGGCG ACGTGATGAC GCGTGAGTGG GGCCGGATCG TCACGGCCGC GGCGCGGGCG GCCGAGCCGT CCCTGGCCGC CGGCACGCGG GCCGGCCTGG TGCGCTACCT GGTCACCGCG GCGCAGACCT TCCGCGCGAA CCCGCTGTTC CGCAAGATCA TTGAGACGGA CCCGGAGCTG CTGGTCCCCT ACGTCCTGGA GCGCCTCGGC GCGACCCAGC GGCTCGTCCT GGAGCTGCTG TGCGAGCAGC TGCGCGAGGC GCAGGCGGGC GGCGCCGTCC GGGCGGGTGA CCCGGCAGCC CAGGCACGGA TGGTGCTGCT CGTCGTGCAG TCGTACGTTC TCTCCGCGGA CGCGCTGGGC GACGAGATCA CCGAGGAGGC ACTGGCGCGT GAGCTCTACC TGACACTGGA CGGCTACCTG GCCCCGCGCG CCGGCGAGAC AGCCGAGGCC GCCTTCGACG CCGCTGACGC AACTGACGCT GTCAGGGCCG TTGACGTCGT TGAGGCCGTC GAGGCTGCTG ACGCAGTTGA CGAGATCCGG CCGATCGAGC ACCCGGGAGC GCCGTCATGA
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Protein sequence | MTGPTSPHTL PAPGRGSARA GALPLDRSGP APGIAPGAGR RGESADAAVL DAAAASLLSV GVRRTTATDV ARRAGVSRMT LYRRWPDLRS LVGDVMTREW GRIVTAAARA AEPSLAAGTR AGLVRYLVTA AQTFRANPLF RKIIETDPEL LVPYVLERLG ATQRLVLELL CEQLREAQAG GAVRAGDPAA QARMVLLVVQ SYVLSADALG DEITEEALAR ELYLTLDGYL APRAGETAEA AFDAADATDA VRAVDVVEAV EAADAVDEIR PIEHPGAPS
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