Gene Franean1_5547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5547 
Symbol 
ID5673877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6716515 
End bp6717315 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content59% 
IMG OID641244403 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_001509807 
Protein GI158317299 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3591] V8-like Glu-specific endopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCG CTGAGGGTGC CGCCGAGGAG GCTATTGATG AGAGCGTTGT TGAGGAGATC 
GCCCAAACGC TCGAGGTCGT CATCGGCGCG GACGACCGGG TGAGGATTCC GAATACCGAT
GCGGCGTTGT GGCAACGGTA CTGCGCATTG CGAATTGAAT TCCCTAGCGG CGCAGTCTAT
CGTGGTACTG GGTTCTTTAT CGGTCGGCGA ACGGTGGCAA CCGCCGGTCA CTGCGTCTAT
CTACACAATC AAGGCGGTTG GGCGCGAAGG ATCGAGGTCA TCCCGGGTTG TAACGGGACT
GAACGTCCGC TTGGCTCTGC GAAGGCGACG ACATTCCGGT CTACCGCCGG ATGGACGAAG
GAGCGGATTC CGGCTGCCGA CTACGGGGCT ATCCTGTTGC CCGATGGCGC CTTCAAAGGA
AAGAATCTCG GCAGCTTCGG ATTCGGCGTA TTCCAAACGA ACATCTTGCT GGCAAAGCCG
GTAGTTCTAG CTGGATACCC AGGCGATAAG CCTTTTGCGC AACTGTGGGG GATGTCTCGA
CGTATTAAGA CTGTCACGAC GACGCAGCTC GTCTACGACA TCGATTCCAT GGGCGGGCAG
AGTGGTGCAC CGGTCTATTT GAAGAATAAC GGTAAGCGCT ACGTGGTTGG AATCCACAAC
TATGGAGCCT CCACGGGTAA CTCTGCGACG CGGGTTACAG AGGCAGTAGC GGAAAACTTC
CGGCGCTGGA GTAAGGCCAA TGTGCCAGCG GCCGCACCGG CACCGGTGCG GCCGCTGGCC
ATGGCTGGCG CGGATTCCTA G
 
Protein sequence
MKRAEGAAEE AIDESVVEEI AQTLEVVIGA DDRVRIPNTD AALWQRYCAL RIEFPSGAVY 
RGTGFFIGRR TVATAGHCVY LHNQGGWARR IEVIPGCNGT ERPLGSAKAT TFRSTAGWTK
ERIPAADYGA ILLPDGAFKG KNLGSFGFGV FQTNILLAKP VVLAGYPGDK PFAQLWGMSR
RIKTVTTTQL VYDIDSMGGQ SGAPVYLKNN GKRYVVGIHN YGASTGNSAT RVTEAVAENF
RRWSKANVPA AAPAPVRPLA MAGADS