| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5494 |
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| Symbol | rpsA |
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| ID | 5673825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6648388 |
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| End bp | 6649869 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641244349 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001509755 |
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| Protein GI | 158317247 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.117184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.159849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGAGCA CCACCGACGT ACGACCCGTG GAGACCGTGA CCACCTCGCA CAGCCCGACC
ACACCACAGG TTGCGGTCAA CGACATCGGC TCGGCGGAGG ATTTCCTCGC CGCGGTCGAC
AAGACGATCA AGTTCTTCAA CGACGGCGAC ATCGTCGACG GCATCATCGT CAAGGTGGAC
CGCGACGAGG TGCTGCTCGA CATCGGTTAC AAGACCGAGG GTGTCATCCC GTCGCGGGAG
CTCTCGATCA AGCATGATGT CGATCCGCAC GAGGTCGTCA CGGTCGGCGA CCACGTCGAG
GCCCTCGTCC TCCAGAAGGA GGACAAGGAA GGCCGTCTGA TCCTGTCCAA GAAGCGTGCG
CAGTACGAGC GCGCCTGGGG CACGATCGAG AAGCTCAAGG AGGAGGACGG CGTCGTCACC
GGCACCGTCA TCGAGGTCGT CAAGGGTGGT CTCATCCTCG ACATCGGCCT GCGCGGCTTC
CTTCCCGCCT CCCTCGTGGA GATGCGCCGG GTCCGCGACC TCCAGCCCTA CGTGGGCCGT
GAGCTCGAAG CCAAGATCAT TGAGCTGGAC AAGAACCGCA ACAACGTGGT TCTGTCCCGC
CGCGCCTGGC TGGAGCAGAC CCAGAGCGAG GTGCGGTCGG AGTTCCTCGC CCAGCTCGCC
AAGGGTCAGA TCCGCAAGGG CGTGGTCAGC TCCATCGTCA ACTTCGGTGC CTTCGTGGAC
CTGGGTGGCG TCGACGGCCT CGTGCACGTG TCCGAGCTGT CCTGGAAGCA CATCGACCAC
CCGTCCGAGG TGGTCGAGGT CGGCCAGGAG GTCACCGTCG AGGTTCTCGA CGTCGACCTG
GACCGCGAGC GGGTCTCCCT GTCGCTGAAG GCGACGCAGG AGGACCCGTG GCGCCAGTTC
GCCCGGACGC ACGCGATCGG CCAGGTCGTA CCCGGTCGGG TCACCAAGCT CGTGCCGTTC
GGCGCGTTCG TCCGCGTGGA CGAGGGCATC GAGGGCCTGG TGCACATCTC GGAGCTGGCC
GAGCGCCACG TCGAGATCCC CGAGCAGGTC GTCAATGTCG GCGACGAGAT CCTGGTCAAG
GTCATCGACA TCGACCTCGA CCGGCGCCGG ATCAGCCTCT CGCTGAAGCA GGCGAACGAG
GCGTCCTCGC TGGTCGCTGA GGGCGAGTCG TTCGACCCGA GCCAGTACGG CATGGAAGCC
AAGTACGACG AGCAGGGCAA CTACGTGTAC CCCGAGGGCT TCGACCCCGA GACCGGCGAG
TGGCTGCCGG GCTTCGAGGA GCAGCAGGCC GAGTGGGAGC GTCAGTACGC GGAGGCCCAG
ACCCGGTTCG AGGCCCACCA GGCCCAGATC CGGGCCGCGC AGGAGGCCGA CGCCGCCGCG
GCGGCACCGT CCTCCTACAC CTCGTCGCAG TCGGAGCAGC CCGCTTCGGC GATCGACGAG
GAGGCGCTGC GACGCCTGCG GGAGCAGTTC GGCCGCGAGT AG
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| Protein sequence | MTSTTDVRPV ETVTTSHSPT TPQVAVNDIG SAEDFLAAVD KTIKFFNDGD IVDGIIVKVD
RDEVLLDIGY KTEGVIPSRE LSIKHDVDPH EVVTVGDHVE ALVLQKEDKE GRLILSKKRA
QYERAWGTIE KLKEEDGVVT GTVIEVVKGG LILDIGLRGF LPASLVEMRR VRDLQPYVGR
ELEAKIIELD KNRNNVVLSR RAWLEQTQSE VRSEFLAQLA KGQIRKGVVS SIVNFGAFVD
LGGVDGLVHV SELSWKHIDH PSEVVEVGQE VTVEVLDVDL DRERVSLSLK ATQEDPWRQF
ARTHAIGQVV PGRVTKLVPF GAFVRVDEGI EGLVHISELA ERHVEIPEQV VNVGDEILVK
VIDIDLDRRR ISLSLKQANE ASSLVAEGES FDPSQYGMEA KYDEQGNYVY PEGFDPETGE
WLPGFEEQQA EWERQYAEAQ TRFEAHQAQI RAAQEADAAA AAPSSYTSSQ SEQPASAIDE
EALRRLREQF GRE
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