Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5430 |
Symbol | |
ID | 5673761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6569704 |
End bp | 6570210 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641244285 |
Product | putative glycosyltransferase (N-glycosyltransferase) (N-glycosyl transferase NGT) |
Protein accession | YP_001509691 |
Protein GI | 158317183 |
COG category | [C] Energy production and conversion [G] Carbohydrate transport and metabolism |
COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.145119 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCGAT TCCTGTTCGC CACAGTCCCG GCCGTCGGCC ACACCGTGCC CGCGCTGCCC ATCGCCCGCG CCCTGATCGA ACGCGGCCAC ACCGTGCGCT GGTACACCGG CGTCGCCTTC GCGGAAAAGA TCACCGCCGT TGGTACGAAA TTCCACCCGA TCACAGATCC CGACTTCGAC TACAGCCTCG TCGGGTTGGA GGAGCATTAT CCGCGGCGCC GGGAGCTGTC CGGGCTGAAA AAGCTGCAGT TCGACCTGGT TCAGGGATTC TCCAAGCCCG TGCCGAACCA GGTACGGGAC CTGATGGCGC TGTTGCAGGA GGAGCCGGCT GACGCGGTGG TCACCGACAC CGCATTCATC GGCGGGGTAC TCCTGCAGGA ACTGGGCGGA CCGCCGGTGG CCGGGTTCGG CATCAGCGTC CTGCCTTTCC CCAGCAGGGA TCTCGCGCCC TTCGGCATGG GTCTGGCGCC GGCCACCGGA CCCGCCGAGC GTCGCATCGT GGCGTAA
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Protein sequence | MARFLFATVP AVGHTVPALP IARALIERGH TVRWYTGVAF AEKITAVGTK FHPITDPDFD YSLVGLEEHY PRRRELSGLK KLQFDLVQGF SKPVPNQVRD LMALLQEEPA DAVVTDTAFI GGVLLQELGG PPVAGFGISV LPFPSRDLAP FGMGLAPATG PAERRIVA
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