Gene Franean1_5430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5430 
Symbol 
ID5673761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6569704 
End bp6570210 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content67% 
IMG OID641244285 
Productputative glycosyltransferase (N-glycosyltransferase) (N-glycosyl transferase NGT) 
Protein accessionYP_001509691 
Protein GI158317183 
COG category[C] Energy production and conversion
[G] Carbohydrate transport and metabolism 
COG ID[COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.145119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGAT TCCTGTTCGC CACAGTCCCG GCCGTCGGCC ACACCGTGCC CGCGCTGCCC 
ATCGCCCGCG CCCTGATCGA ACGCGGCCAC ACCGTGCGCT GGTACACCGG CGTCGCCTTC
GCGGAAAAGA TCACCGCCGT TGGTACGAAA TTCCACCCGA TCACAGATCC CGACTTCGAC
TACAGCCTCG TCGGGTTGGA GGAGCATTAT CCGCGGCGCC GGGAGCTGTC CGGGCTGAAA
AAGCTGCAGT TCGACCTGGT TCAGGGATTC TCCAAGCCCG TGCCGAACCA GGTACGGGAC
CTGATGGCGC TGTTGCAGGA GGAGCCGGCT GACGCGGTGG TCACCGACAC CGCATTCATC
GGCGGGGTAC TCCTGCAGGA ACTGGGCGGA CCGCCGGTGG CCGGGTTCGG CATCAGCGTC
CTGCCTTTCC CCAGCAGGGA TCTCGCGCCC TTCGGCATGG GTCTGGCGCC GGCCACCGGA
CCCGCCGAGC GTCGCATCGT GGCGTAA
 
Protein sequence
MARFLFATVP AVGHTVPALP IARALIERGH TVRWYTGVAF AEKITAVGTK FHPITDPDFD 
YSLVGLEEHY PRRRELSGLK KLQFDLVQGF SKPVPNQVRD LMALLQEEPA DAVVTDTAFI
GGVLLQELGG PPVAGFGISV LPFPSRDLAP FGMGLAPATG PAERRIVA