| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5404 |
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| Symbol | |
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| ID | 5673735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6519510 |
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| End bp | 6520766 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641244259 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001509665 |
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| Protein GI | 158317157 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGGC CGTCCGCGCT GCTCGCACTG CGTTCGTCGC CGTTGCGGCG CTACCTGACC
GGCCAGGTGC CGTCGGTGAC CTGTTCCTGG GCGCAGGTCG TCGCGCTCGC CTGGGTGGTG
GTCGATCTGG ACCCTGCGGC GATGGGCTGG GTGGTGACGC TGCAGTTCCT GCCCAGTCTG
GTCCTGGGAC CGTGGTTCGG CGCGGTCGTC GACCGGCACG ACCGCCGCTG GCTGCTGATG
GGAGCCGAGG CCGGGCTCGG GCTGGTCGCG CTGGCGTACG CCGCCGCGTC CGCGGTGGGC
GGTCTGACAC TGCCGGTCGT CTGCCTGCTC AGCGCCATCT GGGGCGTGGT CAACGCGCTC
GACACGCCGG CCCGGCGAGC CCTGATACCG ATGCTGGTTC CGCCCGCTCA CGCGCCGAGC
GCATCAGCGC TGAGCGGAAC CGTCCTGCTG CTCGGCATGA CGGCCGGGTC CGGACTCGGC
GCCATCACAG TCGCCCAGGT CGGAGTCACC GTCACGTTCG CCGTGAACGC CGTGTCCTTC
CTGGCCGACG TCGTTCTGCT CGCCACGATC CGTGTCGGGC CCTCGCCGCG GGTCGCGCGG
GCGCCCCGGC AGATACGCGA AGGCTTCGGC TATGTGTGGC ACACGCCGCG CCTCCGGACG
CCGTTGATCG GCCTGACGGT GGTCGCGACC TTCGCCTTCA CCATCCAGAC CTCTGTGCCG
ATCTTTGTTG CTCTCTCCTT CGACGGCGGC GCAAGCATGA TCGGCACTGC CTTCATAGCG
GTGACCGCGG GCAGCCTCGT CGGCACGCTG GCCGCGGTCG CTCGGGGCAT GCCCGGCCGG
CACACCCTGC TGCGGGCCAA CCTGGTCATG GCCGGAGCGA TGACCGTGAC CGCCGCTGCT
CCCACGGTGC CGACCGCGCT CATCGGCCTG GCGGGCATCG GTCTCGCGTG GTCCTTCTTC
CTCGGGTCCG TGATCGCCAT CCTGCAGACC GCCGAACCCG CGATGATGGG CCGAGTCATG
TCGCTGTTCG CCGTCGTCCT GCTTGGGGGC ACCGCCGTCG GCGGTCCGAT CGCCGCACTG
CTGGCCACCG CCACCGGGGT GCGCGCGCCG TTCGTCCTCG GAGCGGCGGC CGCCGTCGTG
GCCGTCGCCA TCTCATCGCG ACCTCATGGC AACGCGATGT TGCCGAGCGG CTCGATGGTC
TGCTCCCATT TCCATGGACG ATCAAGAGAT GATCTGATTG CGGGTGGCGG CTGTTGA
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| Protein sequence | MSGPSALLAL RSSPLRRYLT GQVPSVTCSW AQVVALAWVV VDLDPAAMGW VVTLQFLPSL
VLGPWFGAVV DRHDRRWLLM GAEAGLGLVA LAYAAASAVG GLTLPVVCLL SAIWGVVNAL
DTPARRALIP MLVPPAHAPS ASALSGTVLL LGMTAGSGLG AITVAQVGVT VTFAVNAVSF
LADVVLLATI RVGPSPRVAR APRQIREGFG YVWHTPRLRT PLIGLTVVAT FAFTIQTSVP
IFVALSFDGG ASMIGTAFIA VTAGSLVGTL AAVARGMPGR HTLLRANLVM AGAMTVTAAA
PTVPTALIGL AGIGLAWSFF LGSVIAILQT AEPAMMGRVM SLFAVVLLGG TAVGGPIAAL
LATATGVRAP FVLGAAAAVV AVAISSRPHG NAMLPSGSMV CSHFHGRSRD DLIAGGGC
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