| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5390 |
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| Symbol | |
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| ID | 5673722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6499663 |
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| End bp | 6501276 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641244246 |
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| Product | transposase |
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| Protein accession | YP_001509652 |
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| Protein GI | 158317144 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5421] Transposase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGTCG CGATGGACTA CGGGCCGCCG AGCGTCGAGA AGCCGCTCGG CGCGCTGCCC
GTCGTGCGTG ACTACCTGGC CCGTCTCGAT GTCGCGGGCA CGATCGATCG ACTCGCCCCG
ATGCGTGACA AGGTCAACCG GGCCACCCAC GGTGACGTGA TCGCCGCGCT GGTCGCGAAC
CGGCTGACCT CGCCGACCCC GCTGCTGCAC GTCGAGCGGT GGGCACGCCA GTGGGCGGTC
GAGGAGATGT TCGGTATCGC GCCGGACGTG TTGAACGACG ACCGGGTCGG TCGGGCGCTT
GACGCGCTCG CCCCGGTCTG TGAGGCCGTG GTCGGTTCGG TCGGTGCCGC GGCGATCGCC
GCGTTCGGCC TCGACGTCTC CCGTATCCAC TGGGACATGA CGTCGATCTC GCTGCACGGC
GCCTACCCCG AGGTCGACGA GGACTACACG ACCCCGAGAT ACGGCCATCC CAAGGACCGC
CGGCCCGACC TCAAACAGGT CCAGACCGGG CTCGCGGTCA CCGGTGACGG CGGGATCCCG
CTGGTCCACC GCGCCTACGA CGGCGGCGCC GGCGAGGTCG CCCAGGTCAC CGGCGCGATG
CGCGCCCTGG CCACGATCGC CGGCGAACGG CGGTTCCTGC TGGTCGGAGA CAGCAAGCTC
GTTTCCTACG GAAACCTGAC CGCGCTGATC GACGCCGGGG TGGAGTTCCT CGCTCCGGCA
CCGAAACCCG TGGTGCCCGC TTCGACGCTC GCCGGGCTGG ACTGGGCCAG CGCTGGCATC
GTCGAGTACG TCGCCGACCG TGACCAGGCC AGGTTCGCTC ACCAGCGGGC CTCCTACCGG
GCCCGCGAAG GGGTGACAAC GCTGCGCGGG CCACGCAAGA AGGACCCGGT CCTCACGGTG
CGCACGGTCT ACATCTGGTC GTCGGCCCGC GCGCACGCCG CGCGGGCTGC CCGGTCGAGC
AAACTCGACC GGGCCCGCGA CGACCTCGAC CGGCTCTCCC ACGCCGCCGG TTCCCACCAC
CTCTACCGCG ACGTTGCCGC GGTGACCGCC CGCGTCGCGA CGATCGCGGC GAAACGCCGC
GTCGCCGGCT ACCTCCTCAC CGAGACGAGC ACCGACCCGA ACACCGGGAA ACCTGTCCTG
ACCTGGCATT TCGACCAGGC CGCGCTCGAC GCCGAGGCCG CCACCGACGG CTGGTACGCC
CTGCTGACCA ACCTGCCTGA CGACGTCGGC CCGGCCGAGG TCCTCGCCCG TTACAAGGGC
CAGGAGGTCG TCGAACGGCG CTACGGCGCG TTCAAGGGCC CGCTCGCGGT CGCCCCGATG
TTCCTGCACT CCAACCAGCG CATCCACGCG CTCATCCACG TCATCTGCCT GGCGCTGCTC
GTCTTCTCGC TCATCGAGCG CCAGGCACGG CTCGGTGCTG GCCCGGACGG GAAGATCCCC
GGCCTCTACG CCGGCCGGCC CGCCCGGCCC ACCGGCGCGC TCGTCCTCGG CGCACTCAAC
ACACTGCGCC TCATGCCCGC GCGTGACGGC CAGCCCGCTT ACATCCCCCG CCCACCGCGC
CTTCACCAAC ACCTCCTCGA CATCCTCGGC ACCGACCCGA CCCGACCACC TTGA
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| Protein sequence | MSVAMDYGPP SVEKPLGALP VVRDYLARLD VAGTIDRLAP MRDKVNRATH GDVIAALVAN
RLTSPTPLLH VERWARQWAV EEMFGIAPDV LNDDRVGRAL DALAPVCEAV VGSVGAAAIA
AFGLDVSRIH WDMTSISLHG AYPEVDEDYT TPRYGHPKDR RPDLKQVQTG LAVTGDGGIP
LVHRAYDGGA GEVAQVTGAM RALATIAGER RFLLVGDSKL VSYGNLTALI DAGVEFLAPA
PKPVVPASTL AGLDWASAGI VEYVADRDQA RFAHQRASYR AREGVTTLRG PRKKDPVLTV
RTVYIWSSAR AHAARAARSS KLDRARDDLD RLSHAAGSHH LYRDVAAVTA RVATIAAKRR
VAGYLLTETS TDPNTGKPVL TWHFDQAALD AEAATDGWYA LLTNLPDDVG PAEVLARYKG
QEVVERRYGA FKGPLAVAPM FLHSNQRIHA LIHVICLALL VFSLIERQAR LGAGPDGKIP
GLYAGRPARP TGALVLGALN TLRLMPARDG QPAYIPRPPR LHQHLLDILG TDPTRPP
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