Gene Franean1_5352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5352 
Symbol 
ID5673686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6455601 
End bp6456407 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content71% 
IMG OID641244210 
Productmethyltransferase type 11 
Protein accessionYP_001509616 
Protein GI158317108 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCGA GCATCGAACG CGCACGGTCA TGCTGGGAGC GGATGTCAGG AGATGGGGCC 
CGTAGTAGGA GATGCGGGCC CGTGGTATCA GTCAGCGTGT CCGAGTGGGA CGAGACCCTC
TACGGGGGTA GCGCCGAGTT CTACGCCGCC GGGCGGCTGC CCTATCCGCC CGCGCTTGCC
GAGACCTTGC GCGCCGCGCT CGGGCACGCT CCCGTCGGGC GGCTGCTGGA TGTCGGCTGC
GGACCGGGCT CGCTGACCTT GCTGGTGGCC GGCCTCTTCG AAGCGGCCGT GGGCCTCGAC
CCCGATCCGG ACATGATCTC CTATGCCCGT GCGGCGGCGC AGCGCGCGGG AACGGACAAC
GTGACCTGGG TGCGGATGCG TGCCGAGGAC CTGCCAGGCG GGCTTGGAGT CTTCCGCGTT
GTCAGCTTCG CCCAGTCGTT CCACTGGCTC GGCCGTCCCA GGGTCGCTGC CGCCGTCCAC
CCGATGCTGG CACCGGACGG CAGGTGCGTG TTCGTCCACG CCACTACTCA CGAAGGCGTT
CCCGGTGACG ACGTGCTGCC GCATCCCCGG CCGCCCCGGG AGGTGATCGC CTCGCTCGTC
CGCGACTACC TCGGCCTGCA CCGGCGGGCG GGGCGAAGCG TACTGCCCCA GGGCACCCCC
TCAGGAGAGA ACGACATCTT TCGGGCGGCG GGGTTAGGGA CCCACCCTGC TGAACGTGGC
CGGCGGCCTC GTCATCGAAC GCAGCGCCGA CGAGGTGATC GCCTCGGTGT TCTCGCTGTC
CAGCACGGCC CCCCACCTGT TTGGTGA
 
Protein sequence
MAASIERARS CWERMSGDGA RSRRCGPVVS VSVSEWDETL YGGSAEFYAA GRLPYPPALA 
ETLRAALGHA PVGRLLDVGC GPGSLTLLVA GLFEAAVGLD PDPDMISYAR AAAQRAGTDN
VTWVRMRAED LPGGLGVFRV VSFAQSFHWL GRPRVAAAVH PMLAPDGRCV FVHATTHEGV
PGDDVLPHPR PPREVIASLV RDYLGLHRRA GRSVLPQGTP SGENDIFRAA GLGTHPAERG
RRPRHRTQRR RGDRLGVLAV QHGPPPVW