| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5315 |
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| Symbol | |
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| ID | 5673649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6400668 |
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| End bp | 6402920 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641244172 |
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| Product | protein serine phosphatase with GAF(s) sensor(s) |
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| Protein accession | YP_001509579 |
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| Protein GI | 158317071 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.315721 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAAC GTCCCCTCGG CGCCGCGGCC GATCCGGTCG AGGCGTCCGG ACCGGCGCCG
GCCGGGCGGG CGACGTCCGG GCGGGCGACG CACGGATGGG AGAGTCGAGG CCCGGTGATC
GACACGGAGT CCCGCTCGGT GGGCTGGGCC GCCACGACGG CCATGGTTGG CCGCGCCATC
GTCCGCGAGC TGTCGAGTAC CCGGCGCCGG CGCCGCGTGC ACGTCACCGA GGAGGCGACG
TTCGAGCAGC TGTCGTTCCT CGCCGACGCG AGCCTGGTCC TGAGCAGCTC GCTCGACCCG
CAGCGGATCA TCGACATGAT CGCATCCCTG GTTGTGCCCC GGATGGGCGA CGCGGCCGTG
GTCTGGCTTC GCGGCGACGG GGACAGCATT CGGATCGCCG GGTCGCGCTT TCTCGACCCG
AAGACGGCGG ACTTCGTCCG GGCCGTCGTC CAGATCCACC CGCCGACAGC CACCGAGGAC
ATCCCGCCGG GCGTCGTCGT CCGGACCGGC CAGTCGTACT ACGTGCCCCG CTACACCGAG
GACGTCGTCC GCCGACTGTT CCCCGGCGAG GCCGTTGAGC GGTTCGGGGA GATCCAGGCA
GGCGCCGCGA TCACCGTGCC GATGTACGCC CGGGGGAGGG TGTTCGGCGC GCTGACGGTC
GGCCGGCGCG AATCCGTCGA GTACACCGCG CTCGACATCC GCCTCATCGA GGAGCTGGCC
CGGCGCGGCG GCACCGCGCT CGACAACGCG CAGCTCTTCC GGGACGTCGA GGAGTCCGCG
CTGACACTGC AGCGCTCGAT GCTTCCCGCG CACCCGCCGG CCCTGGACGG CATGGAGATC
GCGATGGAGT ACCGGCCCGG CACGGCCGGT ACGGAGGTCG GCGGGGACCT CTACGACGTC
ATCCCGCTGC CCGGCGGGCG GGTCGGCGTG GCGATCGGTG ACGTGATGGG CCGTGGCCTG
CACGCGGCCG CGGTGATGGG CCAGCTGCGG GCCGCACTGC GGGCGTACGC GCTGGAGGAC
TGGGGACCCG CCGAGCTGCT GGCCCGGCTC GACCGGGTTG TCGACTCGCT GCCCGGCCTG
CAGATGGCCA CCTCCATGTA CGCGGTGTAC GACCCCTACT CCGGCCGGAT GACGATCGCG
AGCGCGGGCC ATCCGCCGCC GCTGTTGCTG CTGCCCGACG AGGAGCCGGA CTACCTCGTT
CTCGAGCCCG GGCTCCCGCT CGGGACGGGT GAGCAGGGCA CCTTCTCCGA GCTGACCGTC
TCGCTCCCGT CCGGCTCGGC GTTCGTGATG TTCACCGACG GCCTGGTGGA ATCCCGGCGC
CGGCCGCTCG CGGACGGCCT GGAGCACCTG AGGTCGGGCC TGGGCGAGCA GATCGCCCGT
CCGCGCGCCG TTCGGGCGTT CGCGCCGCCT TCGGGTGATC CGTCTGTGGG CGCGGCGCCT
GCCACGGGTG ATCCGCCCGT GGGCGCGGCG CCTGCCACAG GTGATCCGCC CGTGGGCGCG
GCGCCCGCCG CGGGTGATCC GCCCGCGGCC GTCGTGGCAC TGGCGGCCTC CGCGCCGGCC
GCCGCGGCTG GCGGAGCCAT GGTCACGCCG GAGCGGCGGA TCAGAGAGCG GCGGTCGGGC
CGGGACCGCC GCGGGGGCTA CCGCAGGACG CGGGCGAGCG GTGACCGCCG CCGCACCGGC
GGTGGCTTCG CGGCCCGCAG CTGGTCCGGC CCGGACGCGG TGAGCGGCAG CGGATCGGGC
CCGAGCGAGG AGACCGCCCG GACCCTGCTC GAGCGCTGCC TGCTGGCCGC GGATCTCCCG
CCGCGCACGG ACGACGACAT AGCGCTGCTC GCGCTGGTCA CCCGGCAGCT GCGCCCGCCG
CTGCTCCAGC TCGCGCTGCC CGCCGTCGCC GCATCGGCCG GACAGGCCCG CACGGCCGTC
CGGCGCTCGC TGCTCGACGC CGGGATCGGA TCACTCGACG ACGCGATTCT GCTGGTCAGC
GAGGTGGTCA CCAACGCGGT GCTGCACGCG CGCAGCGATC TCGTGCTGCG GGCCACCCTG
GAACCCGGGC GGCTGCGGGT GAGCGTCGAG GACAGGGAGG GCACCGCCCT GCCCCGGCCC
GGCGGCAACT CCCCGGACGA TCCGGAGGCC GAGCACGGCT GGGGCCTGCT CCTCGTCGAG
GCGCTCGCGC AGGCCTGGGG AGTCGAGACG ACACCGGACG GCAAGCGGGT CTGGTTCGAG
ATGGAGATCC CCGACGAGGC CGACCACACC TGA
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| Protein sequence | MAKRPLGAAA DPVEASGPAP AGRATSGRAT HGWESRGPVI DTESRSVGWA ATTAMVGRAI
VRELSSTRRR RRVHVTEEAT FEQLSFLADA SLVLSSSLDP QRIIDMIASL VVPRMGDAAV
VWLRGDGDSI RIAGSRFLDP KTADFVRAVV QIHPPTATED IPPGVVVRTG QSYYVPRYTE
DVVRRLFPGE AVERFGEIQA GAAITVPMYA RGRVFGALTV GRRESVEYTA LDIRLIEELA
RRGGTALDNA QLFRDVEESA LTLQRSMLPA HPPALDGMEI AMEYRPGTAG TEVGGDLYDV
IPLPGGRVGV AIGDVMGRGL HAAAVMGQLR AALRAYALED WGPAELLARL DRVVDSLPGL
QMATSMYAVY DPYSGRMTIA SAGHPPPLLL LPDEEPDYLV LEPGLPLGTG EQGTFSELTV
SLPSGSAFVM FTDGLVESRR RPLADGLEHL RSGLGEQIAR PRAVRAFAPP SGDPSVGAAP
ATGDPPVGAA PATGDPPVGA APAAGDPPAA VVALAASAPA AAAGGAMVTP ERRIRERRSG
RDRRGGYRRT RASGDRRRTG GGFAARSWSG PDAVSGSGSG PSEETARTLL ERCLLAADLP
PRTDDDIALL ALVTRQLRPP LLQLALPAVA ASAGQARTAV RRSLLDAGIG SLDDAILLVS
EVVTNAVLHA RSDLVLRATL EPGRLRVSVE DREGTALPRP GGNSPDDPEA EHGWGLLLVE
ALAQAWGVET TPDGKRVWFE MEIPDEADHT
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