Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5312 |
Symbol | |
ID | 5673646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6396499 |
End bp | 6397863 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641244169 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001509576 |
Protein GI | 158317068 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.262454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.518656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCATCT CACGTGTCCC GTTTGGTGCT GTCCCGTTCG GTGGCGTGCC CGCCGAACCG GTCGCGGCCG GGCTGCCCCC GGCTGTCATG GGTGCGGAGC CGTCCCTGCT GGCTCAGCCC GTGATCCCGA TGCTCGGCGC GATCCTGTCG CCCACCGCCG CACCGACGAC CGCGGCGACG GTCTCGCCCA GCCCCATACC CTCGGTGTCG ATCTCACCTG GTCCGACGAC GGATCCGTTC GTCTCGATCG AGGGTGTCGC CAACGCGCTG CGGGACGCCT GCGGCACGGA CCCCGGCCTC ATGTGCCGCA CCGTGTACGA CCTCACGCAC AGTAACTATC TTGCGTCCGG TGCCGAGGTG TTCCTCGGTA CGCCGATCAA GATTTCGCTG ATTCTGCTGC TCGCGATGGT GATCCGCACG CTGCTGCACC GGTTCATCCG GCGGACCACC GAACGGGCCG CCTCGGGGCG CAGCACCGGC ATGCTGCGCG GGCTGCGGTC GAACACCTTG CTGGGCGCAT TCGGTGATCC GACCGTTCTG CTCGAGCGGC GGCGCCAGCG CGCCGGAACC GTCGGATCGC TGCTGCGCAG CGTGACGTCA ATCTTTGTGT TCGGGCTGGC TTTCCTCACG ATCCTCGGCG AGCTCGGCCT GAATCTAGCC CCGATCGTGG CCAGCGCCGG AGTGCTCGGC ATCGCCGTCG GTTTCGGTGC GCAGAACCTC GTGCGCGACT TCCTGTCGGG CATGTTCATG CTGCTGGAGG ACCAGTACGG CGTCGGTGAC GTGATCGACG TCGGCCCGGT CTCGGGCACC GTCGAGGCGG TGAGCCTGCG GATGACCCGA TTGCGCGACG TCGAGGGGAC GGTCTGGTAC GTCCGCAACG GCGAGATAAC CCGGGTCGGG AACAAGAGCC AGCAGTGGGC ACGCACCGTT CTCGACGTCC CGCTCGATTA CGACACCGAG GTCGCCGCCG CGAAACGGGT GCTCGTCCGG ACGGCCGACA AGCTGTGGAA GGACGAGGCC TGGTCCGGCC TGATCCTCGC CGAGCCGGAG GTCTGGGGCA TGGAGACCAT GACCGCGGAC GGCTACACGC TGCGGATCGC CATCAAGACC CAGCCGCTCA AGCAGTGGGA CGTCGCCCGC GAGCTGCGGG AGCGGGTCCG GGCGTCGCTC GGCCGGGCCG GGATCGAGCT CGGCACCGTC CAGCGCAGCG AGGTCGTGGT CGTCGACGAC GATGACGACG ACAAGCCCGC CGAGGAGGAG GAGACGCCGG GCGGCACCGG CGGCTCGCCG GGCCAGGGCG CGGACGACGT GCCGACACCC AGGATCGATC CGCCCGCGCC GGCCCGTTCC GGGCATAGCG CCTGA
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Protein sequence | MSISRVPFGA VPFGGVPAEP VAAGLPPAVM GAEPSLLAQP VIPMLGAILS PTAAPTTAAT VSPSPIPSVS ISPGPTTDPF VSIEGVANAL RDACGTDPGL MCRTVYDLTH SNYLASGAEV FLGTPIKISL ILLLAMVIRT LLHRFIRRTT ERAASGRSTG MLRGLRSNTL LGAFGDPTVL LERRRQRAGT VGSLLRSVTS IFVFGLAFLT ILGELGLNLA PIVASAGVLG IAVGFGAQNL VRDFLSGMFM LLEDQYGVGD VIDVGPVSGT VEAVSLRMTR LRDVEGTVWY VRNGEITRVG NKSQQWARTV LDVPLDYDTE VAAAKRVLVR TADKLWKDEA WSGLILAEPE VWGMETMTAD GYTLRIAIKT QPLKQWDVAR ELRERVRASL GRAGIELGTV QRSEVVVVDD DDDDKPAEEE ETPGGTGGSP GQGADDVPTP RIDPPAPARS GHSA
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