Gene Franean1_5257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5257 
Symbol 
ID5673591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6319977 
End bp6321092 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content75% 
IMG OID641244112 
Productgamma-glutamyl kinase 
Protein accessionYP_001509521 
Protein GI158317013 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.313024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCCGTT CCTTCGTCAC CGAAGCGAAC CGGGTCGTCG TCAAGGTCGG CTCGTCGTCG 
CTGACCACGG CGGCCGGTGG GCTGGACGCC GACCGGGTCG AGGCGCTGGT CGCGGCCGTC
GCCGGCCGGG CCGGCAGCCT GGTGCTGGTG TCGTCGGGCG CGATCGCCGC CGGTCTCGCC
CCGCTCGGGC TGACCAGGCG GCCGCGTGAC CTGGCCACCC TGCAGGCGGC GGCGAGCGTC
GGCCAGAGCT CGCTCGTCCA CTGCTACGCC GGCGCGTTCG GCCGGGCCGG GCACCGGGTC
GGCCAGGTCC TGCTCACCGC CACCGACGTG ATCCGGCGGA CGCACTACCG GAACGCGCGC
ACGACCCTGG AGCGGCTGCT GGCCCTCGGT GTCGTGCCGA TCGTGAACGA GAACGACGCG
GTCGCCACCC AGGAGATCCG GTTCGGTGAC AACGACCGGC TCGCCGCGAT CGTCTCCCAC
CTGGTCTCCG CAGACCTGCT CGTCCTGCTC TCCGACGTCG ACGGCGTGTA CGAGTCGAAC
CCGCGGCTGG GGCCGGCGAG CATGGTGCGC GAGGTCCGCT CGGACGCCGA TCTCGACGGC
CTGACCGCCC GCGGCACCGG CGCGGCCGGC GTCGGGGTCG GCGGCATGGC GACGAAGATC
GACGCCGCGC GGATGGCGGC GTCCGGTGGC GTCACGACGG TCGTCACCTC TGCGGCCAAC
GCGGCCGCGG TGCTGGCCGG CGAGGAGATC GGGACGGTGT TCCACCCGAC CGGCCCGCGC
CGGCCGTCCC GCCTGCTCTG GCTGGCCCAC GCCACCGCTC CCGAGGGCCG GCTGCACCTG
GACGAGGGCG CGGTCGCCGC GGTGGTGGAC CGGCGGGCCT CGCTGCTGCC GGCCGGGGTC
ACCAAGGTCG AGGGGGACTT CTCCGCCGGA GACCCGGTCG ACCTGGTCGA CCCGCGGGGC
CGTCCGGTGG CGCGCGGGCT GGTCGAGTTC GACTCCGTCG AGCTGCCGGG CATGCTCGGC
CGCTCGACGA TGGACCTGGC GGCCGAGCGG GGCCCGTCCT ACGAGCGTGA GGTCGTCCAC
CGCGACGACC TCGTCCTGCT CCTCACCCGT CGCTGA
 
Protein sequence
MVRSFVTEAN RVVVKVGSSS LTTAAGGLDA DRVEALVAAV AGRAGSLVLV SSGAIAAGLA 
PLGLTRRPRD LATLQAAASV GQSSLVHCYA GAFGRAGHRV GQVLLTATDV IRRTHYRNAR
TTLERLLALG VVPIVNENDA VATQEIRFGD NDRLAAIVSH LVSADLLVLL SDVDGVYESN
PRLGPASMVR EVRSDADLDG LTARGTGAAG VGVGGMATKI DAARMAASGG VTTVVTSAAN
AAAVLAGEEI GTVFHPTGPR RPSRLLWLAH ATAPEGRLHL DEGAVAAVVD RRASLLPAGV
TKVEGDFSAG DPVDLVDPRG RPVARGLVEF DSVELPGMLG RSTMDLAAER GPSYEREVVH
RDDLVLLLTR R