| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5248 |
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| Symbol | |
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| ID | 5673582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6309619 |
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| End bp | 6310449 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641244103 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001509512 |
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| Protein GI | 158317004 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.225539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGGA TCAAGGGATC AGTCGTCCTG GTGACCGGGG CGAACCGGGG GCTGGGGCGG
GCGTTTGTCG AGGAGCTGCT GGCCCGGGGT GCCGCGAAGG TCTACGCGGC CGCGCGCGAC
CCGCAGTCGG TCCAGACCCC GGGCGCCGTA CCGATCCGGC TGGATGTCAA CGACCCGGCC
CAGGTGGCCG CGGCGGCCGA GGCGACCGGC GACGTCGACA TCCTGATCAA CAACGCCGGC
AGCTCGACCG GCGCGTCGGT GCTCACCGGG GACGTCGACG ACATCCGCCT GGAGCTGGAG
ACCCACTTCT TCGGGCCGCT GCGCACGGTC CGCGCTTTCG CCCCGCAGCT CGCGCGGCAC
CGCGCCGGCG CCGGCGCGGC GGGTGAGGGC AACGCGAACG GGAACGGCGC CGGCGGTGCG
GGAGCCACGG GGCGCGCGGG CGCGTCCGGT GGGGCGGTGC TCAACGTCCT GTCGGCCCTG
TCGTGGTTGG CGGCGCCGAC GAGCGGAGGC TACTGCGCGG CGAAGAGCGC CGCCTGGTCG
CTGACGAACT CCCAGCGGCT GGAGCTGGCC GACCAGGGCG TCGCCGTGAC GGCGCTGCAC
GTCGGCTACA TGGACACCGA CATGACCCGC GCCATCCAGG CGCCGAAGTC GGACCCGGCC
ACCATCGCGG CGCTCGCGCT GGACGGCGTC GAGGCCGGAG CCGCCGAGGT CCTCGCGGAC
GACACGAGCA TTCACATCCG GGCGGCGCTG TCGGGTGGGC TCACCGACCT CTATCCGGCG
CTCGCCGAGC TCTACTCCTC GCGCGAGCCC GTGGCCACGC TGACGGGCTG A
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| Protein sequence | MARIKGSVVL VTGANRGLGR AFVEELLARG AAKVYAAARD PQSVQTPGAV PIRLDVNDPA
QVAAAAEATG DVDILINNAG SSTGASVLTG DVDDIRLELE THFFGPLRTV RAFAPQLARH
RAGAGAAGEG NANGNGAGGA GATGRAGASG GAVLNVLSAL SWLAAPTSGG YCAAKSAAWS
LTNSQRLELA DQGVAVTALH VGYMDTDMTR AIQAPKSDPA TIAALALDGV EAGAAEVLAD
DTSIHIRAAL SGGLTDLYPA LAELYSSREP VATLTG
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