| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5220 |
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| Symbol | |
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| ID | 5673554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6266093 |
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| End bp | 6267769 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641244074 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001509484 |
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| Protein GI | 158316976 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.337283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGCTG ACCCCGACGC CCACGCCCAC GCGGTGCCGG CGGGACGGGC CGGCCGGCGG
GAGTGGACCG GGCTGGCCGT CCTCGCGCTG CCCACGCTGC TGCTGTCGCT GGACCTGAGC
GTTCTCTACC TCGCGCTGCC CGGCCTCACC GAGGACCTGC GGCCCAGCGC CACGCAGCTG
CTGTGGATCA CCGACAGCTA CGGCTTCCTG ATCGCCGGCT TCCTGGTGAC CATGGGAACC
CTCGGCGACC GCGTGGGCCG GCGCCGCCTC CTGCTCGCCG GCGCGGTCGC GTTCGCGCTG
ACGTCCGTGC TGGCGGCCTG GGCGACGAGC CCGACGATGC TGATCGCCGC GCGGGCCCTG
CTCGGGATCG CCGGTGCCAC GCTCATGCCG TCCACCCTCG CGCTGATCAG CAACATGTTC
ACCGACGAAC GGCAGCGGTC CACCGCGGTC GCCGTCTGGA TGAGCTGCTT CCTCGCCGGG
ATGGCGGCCG GCCCGGTGCT CGGCGGCCTG CTGCTGGAGT ACTTCTGGTG GGGTTCGGTG
TTCCTGCTCG GCGTACCGGT CATGGCGCTG CTGGTCGTGA CGGCGCCCGT GCTGCTGCCC
GAGTACCGGC ACCCGGGGGA GGGCCGCCTC GACCTGGTCA GCGCGACGAT GTCGCTGCTC
GCCGTCCTCG CGGTCGTCAA CGGGCTCAAG GAGACGGCGG CGGGTGGTCC GGGCCCGGGT
GCCGGCGGGT CGGTCGCGGT CGGGCTGCTG GTCGGCTGGC TGTTCATCCG CCGCCAGCGC
GGCCGGGCCG ACCCGTTCGT GGACATCGGC CTGTTCGCGA ACCGGTCGTT CACGGCCGCG
CTCGGGCTCA TCCTGTTCGG CGCGTTCGTC ATGGGCGGGA TCAACCTGTT CGTGACGCAG
TACCTGCAGC TGGTCGCGGG ACTCACCCCG CTGCGGGCCG GCCTGTGGCT GGCGCCGGCG
ACGCTGGCCG TCATCGGCAC GAGCCTGGCC GCCCCGGTGG CGGCGCGGTG GATCGGCGCG
GGGCGGGTGG TCGCCGCCGG GCTGGGGGTG AGCGCCGTCG GCCTCGCGAT CCTCACCCGG
GCCGGCGATG GCGGGCTGAT CCTGCTGGGG TTCGGGTTCG TCCTGGTCTT CCTGGGTGTC
GGGCCGCTGG GCGTGCTCGG CACCGATCTG GTGGTCGGAT CAGCGCCGCC CGCGCGGGCC
GGGTCGGCGG CATCGCTGTC GGAGACGGGC AGCGAGCTGG GCGTGGCCCT CGGGGTGGCG
CTGCTCGGCA GCCTGGGCAC GGCCGTCTAC CGGCACCGCC TCGCCGCGGC GATCGACAGC
GGGAGCCCGG CCGGGGGAGC GGGTCGGTCG GCACCGGCCG GGCCGGCCGA TGCCGACCGT
GAAAGCCTCG CCGGTGCGGT ACGGGCGGCG CGATCACTCG CCGACGGCGG AACCGCGGTG
CTGGAGCCGG CCCGCGACGC GTTCACCGCC GGCCTGCACA CCGTCGCCGC GGTGGGATGC
GCGCTGGCGG TTCTGTTCGC GGTGCTCTCG GTCCTCCTCT TCCGCAGCGG CGCGGTGGGT
GGCATGACGG CGAGCGACTC GACAACGGGT GACGTCACAG CCGCTGAACA GACCATCGGA
ATGAATTCCG ATGAAGAGGA CGGAGCTGCG GACGGACGGG GCGACGCGGC GTTCTGA
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| Protein sequence | MPADPDAHAH AVPAGRAGRR EWTGLAVLAL PTLLLSLDLS VLYLALPGLT EDLRPSATQL
LWITDSYGFL IAGFLVTMGT LGDRVGRRRL LLAGAVAFAL TSVLAAWATS PTMLIAARAL
LGIAGATLMP STLALISNMF TDERQRSTAV AVWMSCFLAG MAAGPVLGGL LLEYFWWGSV
FLLGVPVMAL LVVTAPVLLP EYRHPGEGRL DLVSATMSLL AVLAVVNGLK ETAAGGPGPG
AGGSVAVGLL VGWLFIRRQR GRADPFVDIG LFANRSFTAA LGLILFGAFV MGGINLFVTQ
YLQLVAGLTP LRAGLWLAPA TLAVIGTSLA APVAARWIGA GRVVAAGLGV SAVGLAILTR
AGDGGLILLG FGFVLVFLGV GPLGVLGTDL VVGSAPPARA GSAASLSETG SELGVALGVA
LLGSLGTAVY RHRLAAAIDS GSPAGGAGRS APAGPADADR ESLAGAVRAA RSLADGGTAV
LEPARDAFTA GLHTVAAVGC ALAVLFAVLS VLLFRSGAVG GMTASDSTTG DVTAAEQTIG
MNSDEEDGAA DGRGDAAF
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