| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5214 |
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| Symbol | |
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| ID | 5673548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6257603 |
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| End bp | 6260545 |
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| Gene Length | 2943 bp |
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| Protein Length | 980 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641244068 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001509478 |
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| Protein GI | 158316970 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.282248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGCCG CCGTAGTCGC CCACCTTGTC CTCGCCGCGG TCCTGCCCGC GCTGACCGAC
CGGCTGGGCC GCACGGCCTT CCTGCTCGCG GCCGCCGCGC CGGCAGCCAC GTTCGGCTGG
CTGGTGGTCC GGATACCGGC CGTACTCGAC GCGGCCACGG CCGCGCCGTC CGCGCTGGCC
ACACCAGCCG CGACTGGTGT GGCTGCCACG ACGGCCGCCG TCGGAGGGCA CGGCGCCCCC
GCCGGTGACC TGCTGGTCGA GACTCTCACC TGGGCGCCGA CCGTCGAGCT GGAGATCGTG
TTCCGGCTCG CCCCGCTGGC ACTGCTGATG GCGCTGCTCG TCACCGGCGT CGGCGCGGCG
GTGCTGGTCT ACTCGTTCGC CTACCACGCG CCGCACGCGG CCGACGGCGG CGTGCCCGTG
CCGGGCTCGG CGGGGCCGGG CCGGGCGAGC GCCGCGCTGC TCGCGTTCGC GGGCGCGATG
CTGGGGCTGG TCCTGGCCGA CGACCTGTTC ACGCTCTACC TCTTCTGGGA GCTCACCACC
GTCTTCTCCT TCCTGCTGAT CGGGCAGGAC GGCGTGAGCG CCCCCGGCCG GCGGTCCGCC
GTCCAGGCGT TGCTGATCAC CAGCGTCGGG GGCCTGGCGA TGCTGTTCGG CTTCGTCCTG
CTGGGGCAGG CAGCGGGCAC CTACCGGATC TCGCGGATTG TGGCGGCGCC GCCGTCCGGC
GCGGTGGTCA CCGCGGCGCT GGTGCTCGTC CTGCTGGGCG CGGCTACGAA GTCGGCCCAG
ATCCCGTTCC ACTCCTGGCT GCCGGCCGCC ATGGTCGCGC CCACCCCGGT CAGCGCGTAC
CTGCACGCCG CGGCGATGGT GAAGGCCGGG GTGTTCCTCG TGGCGACGCT GACCCCGGCC
TTCGCCGGCG TGGTGGGCTG GCAGGTACCG GCGGTGGCCC TCGGCGCGGC GACGATGCTG
CTCGGCGGCC TGCGCGCGCT GGTGCAGACC GACCTCAAAC GGCTGCTCGC CTTCGGTACC
GTCAGCCAGC TCGGGTTCCT CACCGCGCTG GTCGGGTTCG GGTCGCGCAC CGCGGCGCTG
GCCGGCGCCA CGCTGATCCT CGCGCACGGG CTGTTCAAGG CCGCGCTGTT CATGGTCGTC
GGCATCGTCG ACCACCAGGC CGGGACCCGT GACCTGCGGG ACCTGTCCGG CCTGTGGCGA
AGCGTCCCGG TGGTGTGCGG GGGAGCCGTC CTCGCCGCCG CCTCGATGGT CGGGCTGCCG
CCCTTCCTGG GCTACCTGGG CAAGGAGGCC GCCTTCGAGG CGCTCGTCCA CGGCGGGGCC
GGCGAGCTGG CGCTGCTCGC CGTGTTCGCG GCGGGCTCCT GCCTGACCAC CGGGTACGCG
CTGCGGTTCC TGTGGGGTGC GTTCGGCGCG CGGCCGGGCG CGCCGCCGAG CGCGGTCGCC
CGTCCGGCGG CGGTGTTCGT GGCGCCGGTG GTGGTGCTGG CCCTCGCCGG ACTCGGCCTC
GGGATCGCGC ACCGGGGCGT CGACCGGCTC GTCGCCGCCT ACGCCGACGG CTTCCCCGCC
GGCGCCGCGC GCTACCACCT CGCGCTCTGG CACGGGCCGG GCTGGCCGAT CGCGCTGTCC
GCCGTCGCGG TCGCCGGGGG CGTGCTGGTC TTCGCCGCGG CGGCGGGGCC TCCGCGGCGG
CTGTCGCCGC GCCTGCCCGA TCTCCTGGAC GCGCAGCGCG GCTACGAGCG CGCCGTGCGG
GCACTGGACT GGTCGGCGGT CGCGGTCACC GGCCGGCTGC AGACCGGCTC GCTGCCGGCG
TACCTCGGCG TCATCCTGCT CACGGTGCTC GCGGTGCCGG GCACCGCGCT GGTCACCGGG
ACCTCCTGGC CCGACGACCT GCCCTGGTGG GACTACCGCA TCCAGCTCCC GCTCGCGGTG
GGCATCCTGC TCGCCTCGCT GGCGGTCGTC CGCGCCCGCA GCAGGCTCAC CGCGACGCTG
CTGCTCGGCG CGGTCGGATA CGGGATCGGC GCGCTGTTCG TCGTCGACGG CGCGCCCGAC
CTCGCGCTGG CCCAGTTCCT CGTCGAGACC CTGTCGCTGA TCGTTTTCGT CTTCGTGCTG
CGGCGGATGC CGGTCCGGTT CTCGACGGCC GACCGTTCGT CGCCGCTGCG GCTGCCGCGG
ATCGCCGTCG CCGTCGCCGT CGGGGTTTTC GTGGCCGGGT TCGCGATCGT GACCAGCGGC
TCGCGCGCCG GGATGGCGCA GCCGAGCCGG GAGTTCATCG CACGCTCGCC CGGCGAGACC
GGGGCGACGA ACGTGGTGAA CGCCATCCTG GTCGACTTCC GGGCGTTCGA CACCCTCGGC
GAGATCGCGG TGCTCGCGGT GGCCGCGCTC GGCGTGGCCT CGCTGCTGCT GCTCGTCCGC
ACCCCGCAGG GGCGCACGAT CGACCAGCTG CTCGGCCCGG CGGACCGACG GGCCGAGGAG
CCGGTGCGGG CACGGTCGGT CCTGCTGGAG GTCACGACCC GGGCGGTGTT CCCGGTGGTG
CTCGTGTTCT CGCTGTACCT GCTCTTCGCC GGCCACACCA GGACGGGGGG CGGCTTCTCC
GGCGGGCTCG TCGCCGGCCT GGCGTTCGTC CTGCGTTATG TGGCGGGACG GCGCCGGCGG
GTGGGCGCGG CCGTCCCGGT GGTGCCGACC GCGGTGATCG GCACCGGGCT GGTGACCGCG
GCGGCCGCGG GGCTCGCGCC CGCGCTGCTC GGCGATCCCG TCCTGGAGAG CTATGTGTTC
AAGGGTGATC TGCCGATCCT GGGTCACGTC GAGCTGGTGA CGAGCCTGTT CTTCGACGTC
GGGGTCTACC TGCTGATCAT CGGCGTGGTG CTCGAGCTGC TGCGCACGCT CGGCACCGCC
GTCGACAAGG AGGCCGACGC CGAGATCGAG GCGGGCCGCG AGCGCGTGGA CGAGATCGCA
TGA
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| Protein sequence | MFAAVVAHLV LAAVLPALTD RLGRTAFLLA AAAPAATFGW LVVRIPAVLD AATAAPSALA
TPAATGVAAT TAAVGGHGAP AGDLLVETLT WAPTVELEIV FRLAPLALLM ALLVTGVGAA
VLVYSFAYHA PHAADGGVPV PGSAGPGRAS AALLAFAGAM LGLVLADDLF TLYLFWELTT
VFSFLLIGQD GVSAPGRRSA VQALLITSVG GLAMLFGFVL LGQAAGTYRI SRIVAAPPSG
AVVTAALVLV LLGAATKSAQ IPFHSWLPAA MVAPTPVSAY LHAAAMVKAG VFLVATLTPA
FAGVVGWQVP AVALGAATML LGGLRALVQT DLKRLLAFGT VSQLGFLTAL VGFGSRTAAL
AGATLILAHG LFKAALFMVV GIVDHQAGTR DLRDLSGLWR SVPVVCGGAV LAAASMVGLP
PFLGYLGKEA AFEALVHGGA GELALLAVFA AGSCLTTGYA LRFLWGAFGA RPGAPPSAVA
RPAAVFVAPV VVLALAGLGL GIAHRGVDRL VAAYADGFPA GAARYHLALW HGPGWPIALS
AVAVAGGVLV FAAAAGPPRR LSPRLPDLLD AQRGYERAVR ALDWSAVAVT GRLQTGSLPA
YLGVILLTVL AVPGTALVTG TSWPDDLPWW DYRIQLPLAV GILLASLAVV RARSRLTATL
LLGAVGYGIG ALFVVDGAPD LALAQFLVET LSLIVFVFVL RRMPVRFSTA DRSSPLRLPR
IAVAVAVGVF VAGFAIVTSG SRAGMAQPSR EFIARSPGET GATNVVNAIL VDFRAFDTLG
EIAVLAVAAL GVASLLLLVR TPQGRTIDQL LGPADRRAEE PVRARSVLLE VTTRAVFPVV
LVFSLYLLFA GHTRTGGGFS GGLVAGLAFV LRYVAGRRRR VGAAVPVVPT AVIGTGLVTA
AAAGLAPALL GDPVLESYVF KGDLPILGHV ELVTSLFFDV GVYLLIIGVV LELLRTLGTA
VDKEADAEIE AGRERVDEIA
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