Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5177 |
Symbol | |
ID | 5673511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6212856 |
End bp | 6213755 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641244031 |
Product | hypothetical protein |
Protein accession | YP_001509441 |
Protein GI | 158316933 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.11069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCTGC ACAGTCCCGC ACCACATCCA GGCCTCCCGG GGGACCCGTT CGTCCCGGCC GGCCGGCCGG CGGCGCTCGG CGGGACGCGC CCGGCGTCGG CGCAGCCGCC CGAGCAGGCC GCGCCGGCAC GGCTCGCCCC GCTGACCCGA AGCGCCCGTT CCCACCCGGA GGGCGCTAAG CGGCACTCTC CGACGTCCGG CCAGCGCGAC CAAGGTGCAC GCCCTAACGT TGCCGCCATG GGGGGCACGC GGGCACCGAG CGACGCTCCG GCGCTCTTCG TGGCCGCCAC CGAGGCGCTG CGGGCGGCGT TGGAGGAGCT GCGGCCGGAT GTCGCCGTCC GCGAGATCCC CGCGCCCGCC CGGATCGCTC CCTACGCGTT CGCTCTCGCC GGGGGCCTCA CCGATGACGA CGAGGCGGCC TCCGGCCGGT TCGTGCTGCT GTTCGACCCC GATGGGCAGG ACGCCTGGGA GGGCACCACC CGGATCGTCT GCTATGCGCG CGCCTCGGTG GACCCGGAGG TCGCCGACGA CCCGCTGTTG CCCGGGGTCG CCTGGTCGTG GCTGCGGGAG TCGTTGCAGT CGCACGGCGC CGAGCTCGGC GCCCTCGGCG GGACGGTCAC CACCACCTCG TCCCGGCGCT TCGGGGTGCT CGCCACCGAC GGCGACAACT TCGACGTCGA GCTCCGGTGT TCCTGGTCAC CACGCTGGGC AGGATCGGTG GAGGAAGCCG AGGACCCGAC GGTGCCGGAG CCGCCGCACG GCGGGGCCGA CGGGGCGGCG CCGTGGGACC CGGCGGACGC CGCCGCGCAC CTGCACTCCT TCGCCGACCT GCTGGCCGCG ATGGCGGGGC TGCCGCCGCG CCTCTCCGGG GTCGTACCGC TACCTGCTCG CCGCGCCTGA
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Protein sequence | MSLHSPAPHP GLPGDPFVPA GRPAALGGTR PASAQPPEQA APARLAPLTR SARSHPEGAK RHSPTSGQRD QGARPNVAAM GGTRAPSDAP ALFVAATEAL RAALEELRPD VAVREIPAPA RIAPYAFALA GGLTDDDEAA SGRFVLLFDP DGQDAWEGTT RIVCYARASV DPEVADDPLL PGVAWSWLRE SLQSHGAELG ALGGTVTTTS SRRFGVLATD GDNFDVELRC SWSPRWAGSV EEAEDPTVPE PPHGGADGAA PWDPADAAAH LHSFADLLAA MAGLPPRLSG VVPLPARRA
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