Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5167 |
Symbol | |
ID | 5673501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6197459 |
End bp | 6198271 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641244021 |
Product | hypothetical protein |
Protein accession | YP_001509431 |
Protein GI | 158316923 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.197252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATTC TTCTGTCCGG TGGCGCCCCA GTTCCTCTCG ACGGTCCGGG TCCCCTGGAC ACCCCGGAGG GTGCGCGCGC CGCGGACGAG CGGGACGCTG CCGACCACGA CGCCGACGTC GACCTCGACG TCGCCTACGC GCTGCCGGAG CCGGTCCCGG GGGTCCCGCA CGTCCGGTCC AACTTCGTGA CGTCCGCCGA CGGCGCCATC GAGATCAACG GGCGCTCCGC GGACCTGGGC GGCCCCGCCG ACCTGCGGGT GTTCCGGACG CTGCGCTGGC TCAGCGACGT GGTCCTGGTC GGCGCCGGCA CCGCGCGGAC CGAGGACTAC GGCCCGGTCC TCGTGCCGGC CGAGCGGCGG GAACGGCGAG CTGCCGCCGG GCTCACGCCC GTTCCCCCCG TCGCGGTCGT CAGCGGGCGG CTCGAGCTCG ACCCGGACGC CCGCCTGTTC ACCGCGGCCG TCCGGCCGCT GCTGCTGACC TGCGAGGCCG CCCCGCCGCT GCGGCGGCGG GCGCTCGAGC CGGTGGCGGA GATCGTGGTC TGCGGGGACG AGACCGTCGA GCCGCGCGCG GCGCTCGACG CCCTCGCCGA GCGCGGGCTG CTGCGGGTGT TGACCGAGGG CGGCCCACGC CTGCACGCCC AGTTCGCCCA GGCCGGCCTG CTCGACGAGC TGTGCCTGAC CCTCGCCCCG GTCCTCGCCG GGCCGGGGCG CCTGGGGCTG ATGCAGGGCC CGGTGTGGCC GGCGCCCGTC GGTCTGCGGC TCGGCCAGGT CCTGGAGGAG GACGGGGCGC TCTTCCTGCG CTACCTCCGC TGA
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Protein sequence | MRILLSGGAP VPLDGPGPLD TPEGARAADE RDAADHDADV DLDVAYALPE PVPGVPHVRS NFVTSADGAI EINGRSADLG GPADLRVFRT LRWLSDVVLV GAGTARTEDY GPVLVPAERR ERRAAAGLTP VPPVAVVSGR LELDPDARLF TAAVRPLLLT CEAAPPLRRR ALEPVAEIVV CGDETVEPRA ALDALAERGL LRVLTEGGPR LHAQFAQAGL LDELCLTLAP VLAGPGRLGL MQGPVWPAPV GLRLGQVLEE DGALFLRYLR
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