Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5097 |
Symbol | |
ID | 5673432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6100453 |
End bp | 6101952 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 641243948 |
Product | UDP-N-acetylmuramate--alanine ligase |
Protein accession | YP_001509362 |
Protein GI | 158316854 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.393339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.052337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGCGC GAGATCTCCC GGAGGGCTGG CGGCGGGTCC ACCTCGTCGG CATCGGCGGG ATCGCCATGA GCGGTCTGGC ACGGTTGCTG GTCGCGCGGG GCGCGACGGT CTCCGGCAGC GACGCGGTCG AGTCCCGGCG GCTGGCGTCG CTGCGCGCGC TCGGCGTCCC GGTCACGGTG GGCAACGGCC CCGACAGGTT CGACGCCTCG CGCCTCGACG GGGTCGAGCT GGTCGTCGTC GCGCCAGCGG TGCCGGGCGA CGACCTGGAG CTCGCCGAGG CGCGCCGGCG CGAGCTGCGG GTGCTGACCC GCTCCGCCGC GCTCGCCGGG CTGATGGCCG GGCACCGAGG CGTGGCGGTC GCGGGCTCGC ACGGCAAGAC CACCGTGGCG ATGATGCTCA CCGCCGCCCT GCAGGCCTGC GGCGCGGACC CGACGTTCGC GGTCGGCGGG GATCCGGGCG AGGCCGGCTC GCACACCCAC GCGGGCAGCT CCGAGCTGAT GGTCGTCGAG GCGGACGAGG ACGCCGGCGC GTTCTGGCAG CTCCAGCCGT ACGGCGCGGT GCTGACAGGG GTGGCCGCCG AGCACCTCGA CCACTACCGG ACGATGCCCG CCCTCGCCGC CTCGTTCGCG ACGTTCCTGC GCCGGGTCGA CCCGGGCGGC TTCCTGGTCG CCTGCGTGGA CGACGCGGCC GGGTGGGCGC TCGCCACGGC GGCGGCCGAC CACGCCGACC GCTGGCGCCG GGCCGGCGCC AGCGCCAGCG CCAGCGCCCC GGACGGTGGC CGGCCGTGGC TGACGGGGTA CGGGTTCGGG CCGTCGGCGG ACGTCCGGCT CGTCGCCGAG GAGATCTCGA TCGCGGGCAC CAGCGCGGAG GTCGTCGTCC ATGGCGTCCG GCTGGGCCGG CTGTCGCTGC GGGTCCCCGG CCGGCACCAC CTCCTGGACG CCGCGGCGGC CCTGGCCGCC GGGATCGCCC TGGGCGCCCC GCCGGCCGGC CTGCTGGCCG GGCTGACCGA GTTCGCCGGG GTCCGCCGCC GCTTCGAGTC GCTCGGGTCG GCGGGCGGGG TGCGGGTGGT CGACGACTAC GCCAACCACC CGGACCGGGT GGCCGCCGCG GTCGAGGCGG CGCGGGCGGC TGCCGGCGGC GGCCGGGTCG TCGTCGCGTT CCAGCCGCAC CTGTACAGCC GCACGGCCCT GCTCGCCGAC CGGTTCGGTG CCGCGCTGGG CTCGGCCGAC GCGGTCGTGG TGATGGACGT CTACGGCGCC GGGGAGCAGC CCGAACCGGG CGCGGGCGGT GCCCGGGTCG CCGCGGCCAC CCGGTCCGGG GCGGCGCGGG TCGGGGCGGC GCGGGTCGTG TACGAGCCGT CGTGGTCGGC CGTCCCGGGC GTGCTGATGG ACCTGGCACG GCCGGGCGAC CTGGTCATGA CGCTCGGCGC CGGGGACGTG ACGCAGGTCG GCCCGGAGCT GCTGCGTCTG CTGGCCGAAC GGTCGGCCCT GCCGGGCTAG
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Protein sequence | MTARDLPEGW RRVHLVGIGG IAMSGLARLL VARGATVSGS DAVESRRLAS LRALGVPVTV GNGPDRFDAS RLDGVELVVV APAVPGDDLE LAEARRRELR VLTRSAALAG LMAGHRGVAV AGSHGKTTVA MMLTAALQAC GADPTFAVGG DPGEAGSHTH AGSSELMVVE ADEDAGAFWQ LQPYGAVLTG VAAEHLDHYR TMPALAASFA TFLRRVDPGG FLVACVDDAA GWALATAAAD HADRWRRAGA SASASAPDGG RPWLTGYGFG PSADVRLVAE EISIAGTSAE VVVHGVRLGR LSLRVPGRHH LLDAAAALAA GIALGAPPAG LLAGLTEFAG VRRRFESLGS AGGVRVVDDY ANHPDRVAAA VEAARAAAGG GRVVVAFQPH LYSRTALLAD RFGAALGSAD AVVVMDVYGA GEQPEPGAGG ARVAAATRSG AARVGAARVV YEPSWSAVPG VLMDLARPGD LVMTLGAGDV TQVGPELLRL LAERSALPG
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