| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5072 |
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| Symbol | |
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| ID | 5673407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6072461 |
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| End bp | 6073096 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641243923 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001509337 |
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| Protein GI | 158316829 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.144386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0360395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTGA TCCCGACCGA CGCCGACCTG CTCGTGCGGT CCGTGCGTGA GCCCGAGGTC
TTTGCCGACC TCTTCGAGCG CCACGGTGAC CGGGTGCACC GGTACCTGGC CCGGCGGGCC
GGGCCGGACC TCGCCGAGGA CCTGGTCTCC GACACCTTCG TCGCCGCCTT CGAGCAGCGT
TCCCGGTTCG ACCCGACGCG CGGGCCGGAC GGCGCGCTGC CCTGGCTGCT GGGCATCGCG
ACCAGGATCT TGCAGGGCCA CCGGCGGGCC GAGGCCCGGC GCTGGCGGGT GTTGGAGCGG
GCGCTGCCCG ACCGGCCAGA GCCCGCGGCG GCGGACCGGG TCGCGGACCG CGTCGACGCG
AACGCCGCCG TCCAGTCCCT GGTCCGCGCG CTCGCCGAGC TCCCCGACGG CGAGCGGGAC
GCGCTGCTGC TCCTGGCCTG GGGAGACCTG CGGTACGAGG AGATCGCGAC CGCCCTCGCC
GTGCCCGTCG GCACCGTCCG GTCGCGCATC CACCGGGCCC GCAACCGGCT GCGCGCCGCG
CTGGCCGACG ACCGGCCGGC CGCCGATCCG CCGGCCGCCA GGTCGGCCCC GACCCGCTCC
GACTTCCGTC CTTTTCTGGA GAGTGAGCCA TCATGA
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| Protein sequence | MTVIPTDADL LVRSVREPEV FADLFERHGD RVHRYLARRA GPDLAEDLVS DTFVAAFEQR
SRFDPTRGPD GALPWLLGIA TRILQGHRRA EARRWRVLER ALPDRPEPAA ADRVADRVDA
NAAVQSLVRA LAELPDGERD ALLLLAWGDL RYEEIATALA VPVGTVRSRI HRARNRLRAA
LADDRPAADP PAARSAPTRS DFRPFLESEP S
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