Gene Franean1_4964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4964 
Symbol 
ID5673303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5957221 
End bp5958042 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content71% 
IMG OID641243818 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001509234 
Protein GI158316726 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.143968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.90193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG AGAACACAGC CAGCCCGGCC CGCCCTGACG CCGACGAGCT GATCTACACG 
GTGGACGGCG CCATCGCGAC GATCACCCTC AACCGGCCGC AGGTGAAGAA CGCGTTCACC
CTGACCATGA TCGACCGTTG GGCGGAGGCG CTGCGGTCCG CGGCCGCCGA CCCCCGGGTA
CGGGTCGTCG TCGTGACCGG CGCCGGCGGC GCCTTCTGCT CGGGGATCGA CCTGGCGGTG
CTGGGCGGCA TCGAGCCCAC ACCGATCGCG CGCCGGCGGA TGCTCACCGA GGGCGTCCAC
AAGGTGGCCC GCGCCGTCCT CGACCTGGAG AAGCCGCTCA TCGCGGCGAT CAGCGGGGTG
GCCGTCGGCG CCGGGCTCGA CATGGCGCTG ATGTGCGACC TGCGGTTCGC GGGGCGCTCG
GCGCGGCTGG CCGAGGGCTA CATCAAGATC GGCCTGGTTC CCGGCGATGG CGGGTGCTAC
CTGCTTCCCC GCCTGGTCGG GCCGGCCAAG GCGCTGGAAC TGCTGCTGAC CGGCGACACG
GTGGACGGCG TCGAGGCCGA GCGGATCGGC ATGGTGAACC GGGTCTATGA GGACGACGAG
CTCCTCGACG CGACCTACGC GTTCGCCGGG CGGCTCGCGG GCATGTCCCC CATCTCCGCC
GCCATGATCA AGAAGACCGT CTACCAGTCG CAGACCATGG ACCTGCGCGC CAGCCTCGAC
ATGATCGCCT CGCACATGGC GATCGTGCAG TCCACCGAGG ATTACGCCGA GGCACGGGCA
GCGTTCGCCG AGCGGCGGAC CCCCGGCTTC ACGGGGCGCT GA
 
Protein sequence
MSDENTASPA RPDADELIYT VDGAIATITL NRPQVKNAFT LTMIDRWAEA LRSAAADPRV 
RVVVVTGAGG AFCSGIDLAV LGGIEPTPIA RRRMLTEGVH KVARAVLDLE KPLIAAISGV
AVGAGLDMAL MCDLRFAGRS ARLAEGYIKI GLVPGDGGCY LLPRLVGPAK ALELLLTGDT
VDGVEAERIG MVNRVYEDDE LLDATYAFAG RLAGMSPISA AMIKKTVYQS QTMDLRASLD
MIASHMAIVQ STEDYAEARA AFAERRTPGF TGR